RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 EFCAB8A8MWE9 144 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 STX10O60499 249 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 DPYDQ12882 1025 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 PTGDRQ13258 359 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 ENAHQ8N8S7 591 aaPredicted RBP13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 ESR2Q92731 530 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 TFR2Q9UP52 801 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 GLI3P10071 1580 aa13.19□□□□□ -0.3
ATP2A1-202ENST00000395503 N4BP3O15049 544 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 CCDC175P0C221 793 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 OAS2P29728 719 aaKnown RBP13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 KRT2P35908 639 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 TBX2Q13207 712 aaPredicted RBP13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 HINFPQ9BQA5 517 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 GTF2E1P29083 439 aaPredicted RBP13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 NR1I3Q14994 352 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 COL18A1P39060 1754 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 FAM237AA0A1B0GTK4 181 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 USP17L21D6R901 530 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 XBP1P17861 261 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 ALX1Q15699 326 aa13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
ATP2A1-202ENST00000395503 EXOC5O00471 708 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 KCNJ6P48051 423 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 SARSP49591 514 aaKnown RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 NLRP5P59047 1200 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 CYP2D6P10635 497 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 ARFGAP3Q9NP61 516 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 MRFAP1Q9Y605 127 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 PHACTR2O75167 634 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 PKN1Q16512 942 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 ZNF512BQ96KM6 892 aaPredicted RBP13.17□□□□□ -0.3
ATP2A1-202ENST00000395503 KIF5CO60282 957 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 CUL4BQ13620 913 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 SMC1AQ14683 1233 aaKnown RBP13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 ZRANB2O95218 330 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 CCDC152Q4G0S7 254 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 ADGRG1Q9Y653 693 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 KLRK1P26718 216 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 ZNF34Q8IZ26 560 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 GOLGA1Q92805 767 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 TRIM10Q9UDY6 481 aa13.16□□□□□ -0.3
ATP2A1-202ENST00000395503 PP2D1A8MPX8 630 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 GNAT2P19087 354 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 ERCC3P19447 782 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 HNRNPH2P55795 449 aaKnown RBP13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 GDAP1L1Q96MZ0 367 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 LMTK3Q96Q04 1460 aa13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
ATP2A1-202ENST00000395503 ENC1O14682 589 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 TNS2Q63HR2 1409 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 ADD3Q9UEY8 706 aaKnown RBP13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 CCDC66A2RUB6 948 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 TUBB4AP04350 444 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 GYPCP04921 128 aa13.14□□□□□ -0.31
ATP2A1-202ENST00000395503 LMAN1P49257 510 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms