RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 SLC45A1Q9Y2W3 748 aa14.02□□□□□ -0.17
HLA-DQA1-203ENST00000395363 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.17
HLA-DQA1-203ENST00000395363 A0A1W2PRG0 241 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 AKR1B1P15121 316 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 GRK4P32298 578 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 TTC6Q86TZ1 520 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 OSBP2Q969R2 916 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SEC62Q99442 399 aaKnown RBP14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 PNMA3Q9UL41 463 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SLC4A4Q9Y6R1 1079 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
HLA-DQA1-203ENST00000395363 USP17L12C9JPN9 530 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 USP17L21D6R901 530 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 HERVK_113P62684 666 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 TRIM32Q13049 653 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 ARHGEF6Q15052 776 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 FAM110CQ1W6H9 321 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 PI4K2BQ8TCG2 481 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 UNC93B1Q9H1C4 597 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 BIN2Q9UBW5 565 aaPredicted RBP14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SMCHD1A6NHR9 2005 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 MCM3APO60318 1980 aa14□□□□□ -0.17
HLA-DQA1-203ENST00000395363 ADCY3O60266 1144 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 INHAP05111 366 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CCL5P13501 91 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 VCAM1P19320 739 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 Q3C1V9 767 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CERS3Q8IU89 383 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 PORCNQ9H237 461 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 EPB41L4AQ9HCS5 686 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
HLA-DQA1-203ENST00000395363 IGSF3O75054 1194 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CNMDO75829 334 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CTR9Q6PD62 1173 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 USP17L2Q6R6M4 530 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 NBPF11Q86T75 865 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 EXOC6Q8TAG9 804 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 RBPJLQ9UBG7 517 aa13.98□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SALL3Q9BXA9 1300 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 RANBP2P49792 3224 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 GNRH1P01148 92 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 HOXD10P28358 340 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CDK8P49336 464 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 PABPC4Q13310 644 aaKnown RBP eCLIP13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 C12orf60Q5U649 245 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SIAH1Q8IUQ4 282 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 STRBPQ96SI9 672 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
HLA-DQA1-203ENST00000395363 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 GPAA1O43292 621 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 MX1P20591 662 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 CYP2B6P20813 491 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 GCLCP48506 637 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 PRMT2P55345 433 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 ERVK-9P63128 1117 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 ERVK-24P63145 666 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 KIAA1683Q9H0B3 1180 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 BTBD7Q9P203 1132 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 MORF4L1Q9UBU8 362 aa13.96□□□□□ -0.17
HLA-DQA1-203ENST00000395363 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 PRDM1O75626 825 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ATP2B2Q01814 1243 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 CCL14Q16627 93 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TMED8Q6PL24 325 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 C16orf86Q6ZW13 317 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TRIB2Q92519 343 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 APPBP2Q92624 585 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 COA7Q96BR5 231 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ATP8A2Q9NTI2 1148 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GJD2Q9UKL4 321 aa13.95□□□□□ -0.18
HLA-DQA1-203ENST00000395363 IGHDP01880 384 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ICA1Q05084 483 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 WDR78Q5VTH9 848 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 CATSPERGQ6ZRH7 1159 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GPRC5AQ8NFJ5 357 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms