RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 FCGRTP55899 365 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 IRX3P78415 501 aaPredicted RBP16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 ZMYM1Q5SVZ6 1142 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 TMEM179Q6ZVK1 233 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 SLC44A5Q8NCS7 719 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 ACER1Q8TDN7 264 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 ARMC5Q96C12 935 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 C12orf42Q96LP6 360 aa16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 P2RX7Q99572 595 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 ARPP21Q9UBL0 812 aaPredicted RBP16.76■□□□□ 0.27
HLA-DMA-203ENST00000395305 CENPFP49454 3210 aa16.75■□□□□ 0.27
HLA-DMA-203ENST00000395305 SMIM22K7EJ46 135 aa16.75■□□□□ 0.27
HLA-DMA-203ENST00000395305 APPP05067 770 aa16.75■□□□□ 0.27
HLA-DMA-203ENST00000395305 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
HLA-DMA-203ENST00000395305 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
HLA-DMA-203ENST00000395305 FEZ1Q99689 392 aa16.75■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 SOX10P56693 466 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 SLC9C1Q4G0N8 1177 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 OSBPL3Q9H4L5 887 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 MORF4L1Q9UBU8 362 aa16.74■□□□□ 0.27
HLA-DMA-203ENST00000395305 A0A1W2PRG0 241 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 AKR1B1P15121 316 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 HERVK_113P62684 666 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 ZYXQ15942 572 aaKnown RBP16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 SIAH1Q8IUQ4 282 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 PLEKHM2Q8IWE5 1019 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 IFNL3Q8IZI9 196 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 GTF3C2Q8WUA4 911 aaPredicted RBP16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 NACAP1Q9BZK3 213 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 ZSWIM8A7E2V4 1837 aa16.73■□□□□ 0.27
HLA-DMA-203ENST00000395305 MGAMO43451 1857 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 TDO2P48775 406 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 ZNF333Q96JL9 665 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 EPB41L4AQ9HCS5 686 aaPredicted RBP16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 HELLSQ9NRZ9 838 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 RBPJLQ9UBG7 517 aa16.72■□□□□ 0.27
HLA-DMA-203ENST00000395305 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 MYH8P13535 1937 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 COA7Q96BR5 231 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 GABRQQ9UN88 632 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 TMX2Q9Y320 296 aa16.71■□□□□ 0.27
HLA-DMA-203ENST00000395305 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
HLA-DMA-203ENST00000395305 VCAM1P19320 739 aa16.7■□□□□ 0.26
HLA-DMA-203ENST00000395305 RASA1P20936 1047 aa16.7■□□□□ 0.26
HLA-DMA-203ENST00000395305 PRKCZQ05513 592 aa16.7■□□□□ 0.26
HLA-DMA-203ENST00000395305 TMEM106CQ9BVX2 250 aa16.7■□□□□ 0.26
HLA-DMA-203ENST00000395305 SH2D4AQ9H788 454 aa16.7■□□□□ 0.26
HLA-DMA-203ENST00000395305 DOCK3Q8IZD9 2030 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 GRK4P32298 578 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 FLT3LGP49771 235 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 ICA1Q05084 483 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 IRF5Q13568 498 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 Q3C1V9 767 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 POTEEQ6S8J3 1075 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 LBX2Q6XYB7 198 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 ZNF444Q8N0Y2 327 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 LPAR1Q92633 364 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 NAPBQ9H115 298 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 RPAP3Q9H6T3 665 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 TXNRD2Q9NNW7 524 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 HOXC10Q9NYD6 342 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 RABGAP1Q9Y3P9 1069 aa16.69■□□□□ 0.26
HLA-DMA-203ENST00000395305 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 SLC3A2P08195 630 aaKnown RBP16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 COG2Q14746 738 aa16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 ALX1Q15699 326 aa16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 CCDC129Q6ZRS4 1044 aa16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 SLAIN1Q8ND83 568 aa16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms