RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 KIF1BPQ96EK5 621 aa23.37■■□□□ 1.33
COL11A2-204ENST00000395194 MYH7P12883 1935 aa23.37■■□□□ 1.33
COL11A2-204ENST00000395194 ZNF532Q9HCE3 1301 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 IFIT2P09913 472 aaKnown RBP23.36■■□□□ 1.33
COL11A2-204ENST00000395194 MAPK4P31152 587 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 TTF1Q15361 905 aaPredicted RBP23.36■■□□□ 1.33
COL11A2-204ENST00000395194 GPR142Q7Z601 462 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 NECAB2Q7Z6G3 386 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 SIRT2Q8IXJ6 389 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 SDR42E1Q8WUS8 393 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 SOCS4Q8WXH5 440 aa23.36■■□□□ 1.33
COL11A2-204ENST00000395194 CWC22Q9HCG8 908 aaKnown RBP23.36■■□□□ 1.33
COL11A2-204ENST00000395194 MS4A1P11836 297 aa23.35■■□□□ 1.33
COL11A2-204ENST00000395194 CCL14Q16627 93 aa23.35■■□□□ 1.33
COL11A2-204ENST00000395194 C12orf42Q96LP6 360 aa23.35■■□□□ 1.33
COL11A2-204ENST00000395194 CRNKL1Q9BZJ0 848 aaKnown RBP23.35■■□□□ 1.33
COL11A2-204ENST00000395194 CABP5Q9NP86 173 aa23.35■■□□□ 1.33
COL11A2-204ENST00000395194 MCM9Q9NXL9 1143 aa23.35■■□□□ 1.33
COL11A2-204ENST00000395194 LAMA3Q16787 3333 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L15C9J2P7 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L13C9JLJ4 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L11C9JVI0 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L18D6R9N7 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L22D6RA61 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L17D6RBQ6 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L19D6RCP7 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L20D6RJB6 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 HMMRO75330 724 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 ZKSCAN1P17029 563 aaPredicted RBP23.34■■□□□ 1.33
COL11A2-204ENST00000395194 VCAM1P19320 739 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP14P54578 494 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 USP17L24Q0WX57 530 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 SLFNL1Q499Z3 407 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 WDR78Q5VTH9 848 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 PLEKHH3Q7Z736 793 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 LCORLQ8N3X6 602 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 GTF3C2Q8WUA4 911 aaPredicted RBP23.34■■□□□ 1.33
COL11A2-204ENST00000395194 DDX19BQ9UMR2 479 aa23.34■■□□□ 1.33
COL11A2-204ENST00000395194 FRMPD3Q5JV73 1810 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 MPHOSPH10O00566 681 aaKnown RBP23.33■■□□□ 1.33
COL11A2-204ENST00000395194 CNMDO75829 334 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 CYP2D6P10635 497 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 GUCY1A2P33402 732 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 SEPT2Q15019 361 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 RPAP2Q8IXW5 612 aaPredicted RBP23.33■■□□□ 1.33
COL11A2-204ENST00000395194 C7orf61Q8IZ16 206 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 ZBTB40Q9NUA8 1239 aa23.33■■□□□ 1.33
COL11A2-204ENST00000395194 CAPN2P17655 700 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 RGS2P41220 211 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 MORN1Q5T089 497 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 MAP3K21Q5TCX8 1036 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 TMED8Q6PL24 325 aaPredicted RBP23.32■■□□□ 1.32
COL11A2-204ENST00000395194 CATSPERGQ6ZRH7 1159 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 ANKLE1Q8NAG6 615 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 SLC44A5Q8NCS7 719 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 KIAA1683Q9H0B3 1180 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 PRO3102Q9H379 93 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 BOLA2Q9H3K6 86 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 ARMT1Q9H993 441 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 RABGAP1Q9Y3P9 1069 aa23.32■■□□□ 1.32
COL11A2-204ENST00000395194 TCRBV5S4A2TA0A5A2 114 aa23.31■■□□□ 1.32
COL11A2-204ENST00000395194 XRCC5P13010 732 aaKnown RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 CCND3P30281 292 aaPredicted RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 MNX1P50219 401 aaPredicted RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 GABPAQ06546 454 aa23.31■■□□□ 1.32
COL11A2-204ENST00000395194 CACNB2Q08289 660 aaPredicted RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 USP6NLQ92738 828 aa23.31■■□□□ 1.32
COL11A2-204ENST00000395194 RPAP3Q9H6T3 665 aaPredicted RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 DCP1AQ9NPI6 582 aaPredicted RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 STAP2Q9UGK3 403 aa23.31■■□□□ 1.32
COL11A2-204ENST00000395194 ZMYND8Q9ULU4 1186 aaPredicted RBP23.31■■□□□ 1.32
COL11A2-204ENST00000395194 DYNLL2Q96FJ2 89 aa23.3■■□□□ 1.32
COL11A2-204ENST00000395194 APBA2Q99767 749 aa23.3■■□□□ 1.32
COL11A2-204ENST00000395194 NBPF3Q9H094 633 aa23.3■■□□□ 1.32
COL11A2-204ENST00000395194 PAG1Q9NWQ8 432 aa23.3■■□□□ 1.32
COL11A2-204ENST00000395194 BTBD7Q9P203 1132 aa23.3■■□□□ 1.32
COL11A2-204ENST00000395194 SPDYE16A6NNV3 312 aaPredicted RBP23.29■■□□□ 1.32
COL11A2-204ENST00000395194 PRKAB2O43741 272 aa23.29■■□□□ 1.32
COL11A2-204ENST00000395194 CHGBP05060 677 aa23.29■■□□□ 1.32
COL11A2-204ENST00000395194 CCNA1P78396 465 aa23.29■■□□□ 1.32
COL11A2-204ENST00000395194 CLEC10AQ8IUN9 316 aa23.29■■□□□ 1.32
COL11A2-204ENST00000395194 C11orf49Q9H6J7 331 aa23.29■■□□□ 1.32
COL11A2-204ENST00000395194 OGDHLQ9ULD0 1010 aa23.29■■□□□ 1.32
COL11A2-204ENST00000395194 RLFQ13129 1914 aa23.28■■□□□ 1.32
COL11A2-204ENST00000395194 A0A1W2PRG0 241 aa23.28■■□□□ 1.32
COL11A2-204ENST00000395194 RAB11FIP3O75154 756 aa23.28■■□□□ 1.32
COL11A2-204ENST00000395194 MBD4O95243 580 aa23.28■■□□□ 1.32
COL11A2-204ENST00000395194 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
COL11A2-204ENST00000395194 TRMT44Q8IYL2 757 aaKnown RBP23.28■■□□□ 1.32
COL11A2-204ENST00000395194 SMIM22K7EJ46 135 aa23.27■■□□□ 1.32
COL11A2-204ENST00000395194 SYN1P17600 705 aa23.27■■□□□ 1.32
COL11A2-204ENST00000395194 FLRT1Q9NZU1 646 aa23.27■■□□□ 1.32
COL11A2-204ENST00000395194 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
COL11A2-204ENST00000395194 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
COL11A2-204ENST00000395194 TANGO6Q9C0B7 1094 aa23.26■■□□□ 1.31
COL11A2-204ENST00000395194 RCAN3Q9UKA8 241 aa23.26■■□□□ 1.31
COL11A2-204ENST00000395194 PFASO15067 1338 aa23.26■■□□□ 1.31
COL11A2-204ENST00000395194 PARP14Q460N5 1801 aa23.25■■□□□ 1.31
COL11A2-204ENST00000395194 SMARCA5O60264 1052 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms