RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TDO2P48775 406 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 FILIP1LQ4L180 1135 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
CLIP2-203ENST00000395060 DRC1Q96MC2 740 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 GPR108Q9NPR9 543 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 PDE6AP16499 860 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 SLC4A8Q2Y0W8 1093 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 C5P01031 1676 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 RNF40O75150 1001 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 KRT9P35527 623 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 PSMB7Q99436 277 aa16.21■□□□□ 0.19
CLIP2-203ENST00000395060 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.18
CLIP2-203ENST00000395060 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.18
CLIP2-203ENST00000395060 IL2RBP14784 551 aa16.21■□□□□ 0.18
CLIP2-203ENST00000395060 PACS2Q86VP3 889 aa16.21■□□□□ 0.18
CLIP2-203ENST00000395060 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.18
CLIP2-203ENST00000395060 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.18
CLIP2-203ENST00000395060 EHD4Q9H223 541 aa16.21■□□□□ 0.18
CLIP2-203ENST00000395060 EPB41L4AQ9HCS5 686 aaPredicted RBP16.21■□□□□ 0.18
CLIP2-203ENST00000395060 ADD3Q9UEY8 706 aaKnown RBP16.21■□□□□ 0.18
CLIP2-203ENST00000395060 ITGA6P23229 1130 aa16.2■□□□□ 0.18
CLIP2-203ENST00000395060 MATR3P43243 847 aaKnown RBP eCLIP16.2■□□□□ 0.18
CLIP2-203ENST00000395060 E2F4Q16254 413 aa16.2■□□□□ 0.18
CLIP2-203ENST00000395060 LRRC31Q6UY01 552 aa16.2■□□□□ 0.18
CLIP2-203ENST00000395060 ERCC3P19447 782 aa16.2■□□□□ 0.18
CLIP2-203ENST00000395060 SART3Q15020 963 aaKnown RBP16.2■□□□□ 0.18
CLIP2-203ENST00000395060 PHRF1Q9P1Y6 1649 aaKnown RBP16.2■□□□□ 0.18
CLIP2-203ENST00000395060 ZNF185O15231 689 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 WTAPQ15007 396 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 SPATA1Q5VX52 437 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
CLIP2-203ENST00000395060 CAGE1Q8TC20 777 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 PAGE5Q96GU1 130 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 PANX2Q96RD6 677 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 ASAP1Q9ULH1 1129 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 MYO6Q9UM54 1294 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 MTMR7Q9Y216 660 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
CLIP2-203ENST00000395060 KRT31Q15323 416 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 MFSD6Q6ZSS7 791 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 FBXL16Q8N461 479 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
CLIP2-203ENST00000395060 SLC20A2Q08357 652 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 IFNL3Q8IZI9 196 aa16.19■□□□□ 0.18
CLIP2-203ENST00000395060 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
CLIP2-203ENST00000395060 GTF2A1P52655 376 aaPredicted RBP16.18■□□□□ 0.18
CLIP2-203ENST00000395060 UBXN1Q04323 297 aa16.18■□□□□ 0.18
CLIP2-203ENST00000395060 KCTD19Q17RG1 926 aaPredicted RBP16.18■□□□□ 0.18
CLIP2-203ENST00000395060 MMS19Q96T76 1030 aa16.18■□□□□ 0.18
CLIP2-203ENST00000395060 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
CLIP2-203ENST00000395060 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
CLIP2-203ENST00000395060 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
CLIP2-203ENST00000395060 ERICH2A1L162 156 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 ATP1A1P05023 1023 aaKnown RBP16.17■□□□□ 0.18
CLIP2-203ENST00000395060 TTC31Q49AM3 519 aaPredicted RBP16.17■□□□□ 0.18
CLIP2-203ENST00000395060 SDR42E1Q8WUS8 393 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 ABHD10Q9NUJ1 306 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 MACROD2A1Z1Q3 448 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 TRIM75PA6NK02 468 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 DNA2P51530 1060 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 DNAJC10Q8IXB1 793 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 MICALL1Q8N3F8 863 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 RASSF8Q8NHQ8 419 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 TMEM87BQ96K49 555 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 STRBPQ96SI9 672 aaKnown RBP16.17■□□□□ 0.18
CLIP2-203ENST00000395060 TMOD3Q9NYL9 352 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 SRPRBQ9Y5M8 271 aaKnown RBP16.17■□□□□ 0.18
CLIP2-203ENST00000395060 DUSP10Q9Y6W6 482 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 V9GY48 417 aaPredicted RBP16.17■□□□□ 0.18
CLIP2-203ENST00000395060 STRCP1A6NGW2 1772 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 CIAO1O76071 339 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 MYBL2P10244 700 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 TCIRG1Q13488 830 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 GNL3LQ9NVN8 582 aaKnown RBP16.17■□□□□ 0.18
CLIP2-203ENST00000395060 SLC4A4Q9Y6R1 1079 aa16.17■□□□□ 0.18
CLIP2-203ENST00000395060 FAM237AA0A1B0GTK4 181 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 ARHGAP25P42331 645 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 PPARAQ07869 468 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 CUL4BQ13620 913 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 CNGA4Q8IV77 575 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
CLIP2-203ENST00000395060 PCMTD1Q96MG8 357 aaPredicted RBP16.16■□□□□ 0.18
CLIP2-203ENST00000395060 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 IVLP07476 585 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 MCM7P33993 719 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 NOP2P46087 812 aaKnown RBP16.16■□□□□ 0.18
CLIP2-203ENST00000395060 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms