RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 FEZ1Q99689 392 aa24.13■■□□□ 1.45
UPK3B-203ENST00000394849 DDX20Q9UHI6 824 aaKnown RBP24.13■■□□□ 1.45
UPK3B-203ENST00000394849 IVNS1ABPQ9Y6Y0 642 aa24.13■■□□□ 1.45
UPK3B-203ENST00000394849 DNM1LO00429 736 aa24.12■■□□□ 1.45
UPK3B-203ENST00000394849 ATP2B2Q01814 1243 aa24.12■■□□□ 1.45
UPK3B-203ENST00000394849 LBX2Q6XYB7 198 aa24.12■■□□□ 1.45
UPK3B-203ENST00000394849 ZNF512BQ96KM6 892 aaPredicted RBP24.12■■□□□ 1.45
UPK3B-203ENST00000394849 IPO8O15397 1037 aaKnown RBP24.11■■□□□ 1.45
UPK3B-203ENST00000394849 PTPREP23469 700 aa24.11■■□□□ 1.45
UPK3B-203ENST00000394849 RARSP54136 660 aaKnown RBP24.11■■□□□ 1.45
UPK3B-203ENST00000394849 ZNF697Q5TEC3 545 aa24.11■■□□□ 1.45
UPK3B-203ENST00000394849 GUCD1Q96NT3 240 aa24.11■■□□□ 1.45
UPK3B-203ENST00000394849 GH2P01242 217 aa24.1■■□□□ 1.45
UPK3B-203ENST00000394849 TATDN1Q6P1N9 297 aa24.1■■□□□ 1.45
UPK3B-203ENST00000394849 TMED8Q6PL24 325 aaPredicted RBP24.1■■□□□ 1.45
UPK3B-203ENST00000394849 POTEEQ6S8J3 1075 aa24.1■■□□□ 1.45
UPK3B-203ENST00000394849 CATSPERGQ6ZRH7 1159 aa24.1■■□□□ 1.45
UPK3B-203ENST00000394849 KIAA1683Q9H0B3 1180 aa24.1■■□□□ 1.45
UPK3B-203ENST00000394849 SNRKQ9NRH2 765 aa24.1■■□□□ 1.45
UPK3B-203ENST00000394849 GRB14Q14449 540 aa24.09■■□□□ 1.45
UPK3B-203ENST00000394849 WDR78Q5VTH9 848 aa24.09■■□□□ 1.45
UPK3B-203ENST00000394849 ADGRA1Q86SQ6 560 aa24.09■■□□□ 1.45
UPK3B-203ENST00000394849 ARRDC4Q8NCT1 418 aa24.09■■□□□ 1.45
UPK3B-203ENST00000394849 EHD4Q9H223 541 aa24.09■■□□□ 1.45
UPK3B-203ENST00000394849 SAP30BPQ9UHR5 308 aaKnown RBP24.09■■□□□ 1.45
UPK3B-203ENST00000394849 MYH1P12882 1939 aa24.08■■□□□ 1.45
UPK3B-203ENST00000394849 CNMDO75829 334 aa24.08■■□□□ 1.45
UPK3B-203ENST00000394849 CYP2E1P05181 493 aaPredicted RBP24.08■■□□□ 1.45
UPK3B-203ENST00000394849 CNGA1P29973 690 aa24.08■■□□□ 1.45
UPK3B-203ENST00000394849 SHROOM1Q2M3G4 852 aaPredicted RBP24.08■■□□□ 1.45
UPK3B-203ENST00000394849 SERPINB13Q9UIV8 391 aa24.08■■□□□ 1.45
UPK3B-203ENST00000394849 PNMA6EA0A0J9YXQ4 647 aa24.07■■□□□ 1.44
UPK3B-203ENST00000394849 TNNI3KQ59H18 835 aa24.07■■□□□ 1.44
UPK3B-203ENST00000394849 FLRT1Q9NZU1 646 aa24.07■■□□□ 1.44
UPK3B-203ENST00000394849 FPGT-TNNI3KV9GXZ4 949 aa24.07■■□□□ 1.44
UPK3B-203ENST00000394849 STRNO43815 780 aa24.06■■□□□ 1.44
UPK3B-203ENST00000394849 TTC6Q86TZ1 520 aa24.06■■□□□ 1.44
UPK3B-203ENST00000394849 CABP5Q9NP86 173 aa24.06■■□□□ 1.44
UPK3B-203ENST00000394849 VCAM1P19320 739 aa24.05■■□□□ 1.44
UPK3B-203ENST00000394849 USP5P45974 858 aa24.05■■□□□ 1.44
UPK3B-203ENST00000394849 ATN1P54259 1190 aaPredicted RBP24.05■■□□□ 1.44
UPK3B-203ENST00000394849 RTP1P59025 263 aa24.05■■□□□ 1.44
UPK3B-203ENST00000394849 RAB3GAP1Q15042 981 aa24.05■■□□□ 1.44
UPK3B-203ENST00000394849 ZYXQ15942 572 aaKnown RBP24.05■■□□□ 1.44
UPK3B-203ENST00000394849 CERKLQ49MI3 558 aaPredicted RBP24.05■■□□□ 1.44
UPK3B-203ENST00000394849 DBNDD2Q9BQY9 259 aa24.05■■□□□ 1.44
UPK3B-203ENST00000394849 MYO5AQ9Y4I1 1855 aaKnown RBP24.04■■□□□ 1.44
UPK3B-203ENST00000394849 CYP7A1P22680 504 aa24.04■■□□□ 1.44
UPK3B-203ENST00000394849 OS9Q13438 667 aaPredicted RBP24.04■■□□□ 1.44
UPK3B-203ENST00000394849 ABCB5Q2M3G0 1257 aa24.04■■□□□ 1.44
UPK3B-203ENST00000394849 OLFML2BQ68BL8 750 aa24.04■■□□□ 1.44
UPK3B-203ENST00000394849 NDUFB9Q9Y6M9 179 aa24.04■■□□□ 1.44
UPK3B-203ENST00000394849 LTBP2Q14767 1821 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 KBTBD13C9JR72 458 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 IGHA2P01877 340 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 CYBAP13498 195 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 CYP2C19P33261 490 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 DPP9Q86TI2 863 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 FAM161BQ96MY7 647 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 SLC5A4Q9NY91 659 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 HOXC10Q9NYD6 342 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 BTBD7Q9P203 1132 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 RLFQ13129 1914 aa24.03■■□□□ 1.44
UPK3B-203ENST00000394849 TRIM27P14373 513 aa24.02■■□□□ 1.44
UPK3B-203ENST00000394849 ZAP70P43403 619 aa24.02■■□□□ 1.44
UPK3B-203ENST00000394849 DYNLL1P63167 89 aaKnown RBP24.02■■□□□ 1.44
UPK3B-203ENST00000394849 POLA2Q14181 598 aa24.02■■□□□ 1.44
UPK3B-203ENST00000394849 NPLOC4Q8TAT6 608 aa24.02■■□□□ 1.44
UPK3B-203ENST00000394849 ATP11BQ9Y2G3 1177 aa24.02■■□□□ 1.44
UPK3B-203ENST00000394849 ZNF236Q9UL36 1845 aa24.02■■□□□ 1.44
UPK3B-203ENST00000394849 SPDYE16A6NNV3 312 aaPredicted RBP24.01■■□□□ 1.43
UPK3B-203ENST00000394849 SMAD3P84022 425 aaKnown RBP24.01■■□□□ 1.43
UPK3B-203ENST00000394849 SLC39A5Q6ZMH5 540 aa24.01■■□□□ 1.43
UPK3B-203ENST00000394849 CDX2Q99626 313 aaPredicted RBP24.01■■□□□ 1.43
UPK3B-203ENST00000394849 RPAP3Q9H6T3 665 aaPredicted RBP24.01■■□□□ 1.43
UPK3B-203ENST00000394849 PIH1D3Q9NQM4 214 aaKnown RBP24.01■■□□□ 1.43
UPK3B-203ENST00000394849 SEPT4O43236 478 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 IDH1O75874 414 aaKnown RBP24■■□□□ 1.43
UPK3B-203ENST00000394849 COG2Q14746 738 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 SNX17Q15036 470 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 C1orf53Q5VUE5 145 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 SHCBP1Q8NEM2 672 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 TRPV1Q8NER1 839 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 SSH3Q8TE77 659 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 SEMA6BQ9H3T3 888 aa24■■□□□ 1.43
UPK3B-203ENST00000394849 MAP3K12Q12852 859 aa23.99■■□□□ 1.43
UPK3B-203ENST00000394849 SHHQ15465 462 aa23.99■■□□□ 1.43
UPK3B-203ENST00000394849 GJC2Q5T442 439 aaPredicted RBP23.99■■□□□ 1.43
UPK3B-203ENST00000394849 MB21D1Q8N884 522 aa23.99■■□□□ 1.43
UPK3B-203ENST00000394849 MAFAQ8NHW3 353 aaPredicted RBP23.99■■□□□ 1.43
UPK3B-203ENST00000394849 ACER1Q8TDN7 264 aa23.99■■□□□ 1.43
UPK3B-203ENST00000394849 VCANP13611 3396 aa23.99■■□□□ 1.43
UPK3B-203ENST00000394849 EYSQ5T1H1 3165 aa23.99■■□□□ 1.43
UPK3B-203ENST00000394849 SURF6O75683 361 aaKnown RBP23.98■■□□□ 1.43
UPK3B-203ENST00000394849 ADORA2AP29274 412 aa23.98■■□□□ 1.43
UPK3B-203ENST00000394849 ABRAQ8N0Z2 381 aa23.98■■□□□ 1.43
UPK3B-203ENST00000394849 MIGA1Q8NAN2 632 aa23.98■■□□□ 1.43
UPK3B-203ENST00000394849 ATP8B2P98198 1209 aa23.97■■□□□ 1.43
UPK3B-203ENST00000394849 MAGEB6Q8N7X4 407 aa23.97■■□□□ 1.43
UPK3B-203ENST00000394849 PRUNE2Q8WUY3 3088 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms