RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 KDM5BQ9UGL1 1544 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 SMARCA5O60264 1052 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 EVI5O60447 810 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 MYL5Q02045 173 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 DMP1Q13316 513 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 BAG1Q99933 345 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 MRPL44Q9H9J2 332 aaKnown RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 TEKT2Q9UIF3 430 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 TRIM35Q9UPQ4 493 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 TNNQ9UQP3 1299 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 BABAM1Q9NWV8 329 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 CALCRLQ16602 461 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 HSP90AA5PQ58FG0 334 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 TMX1Q9H3N1 280 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 RNF8O76064 485 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 CCDC93Q567U6 631 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 AOPEPQ8N6M6 819 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 KRT15P19012 456 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 TFDP1Q14186 410 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 JADE1Q6IE81 842 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 DPP8Q6V1X1 898 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 DEPTORQ8TB45 409 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 AFAP1L1Q8TED9 768 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF518AQ6AHZ1 1483 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 GNPATO15228 680 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 MAP7D3Q8IWC1 876 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 SKA2Q8WVK7 121 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 NAPGQ99747 312 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 SLC13A4Q9UKG4 626 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 DDX5P17844 614 aaKnown RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 NUCB1Q02818 461 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 FAM160B1Q5W0V3 765 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 TRIM11Q96F44 468 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 RILPQ96NA2 401 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 MED10Q9BTT4 135 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 TFIP11Q9UBB9 837 aaKnown RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 GINS2Q9Y248 185 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 RBM8AQ9Y5S9 174 aaKnown RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 RNF40O75150 1001 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 FAM71BQ8TC56 605 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 PPP1R12CQ9BZL4 782 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 TRIM45Q9H8W5 580 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 BRPF3Q9ULD4 1205 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 SMIM23A6NLE4 172 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 AOC3Q16853 763 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 GLG1Q92896 1179 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 CHPF2Q9P2E5 772 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 MROH5Q6ZUA9 1318 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 ARHGEF10O15013 1369 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 F6X3S4 739 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 TTI1O43156 1089 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 UFL1O94874 794 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 F13A1P00488 732 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 KRT19P08727 400 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 PPP2R5AQ15172 486 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 VSIG1Q86XK7 387 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 LMTK3Q96Q04 1460 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 NME9Q86XW9 330 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 CNPY4Q8N129 248 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 XAGE3Q8WTP9 111 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 CTTNBP2NLQ9P2B4 639 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 IMPACTQ9P2X3 320 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 PCF11O94913 1555 aaKnown RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 NUP160Q12769 1436 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 TBC1D8O95759 1140 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 XRCC5P13010 732 aaKnown RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 PSMD6Q15008 389 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 LETM2Q2VYF4 491 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF713Q8N859 430 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-205ENST00000394768 C1orf112Q9NSG2 853 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 HYOU1Q9Y4L1 999 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 EXOC3O60645 756 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 CD19P15391 556 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 ZSCAN23Q3MJ62 389 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 RAB20Q9NX57 234 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF212Q9UDV6 495 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 GCNT3O95395 438 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 ERCC3P19447 782 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 HOMER3Q9NSC5 361 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 ABCC1P33527 1531 aa8.19□□□□□ -1.1
SYNE2-205ENST00000394768 URB2Q14146 1524 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 PHEXP78562 749 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 WAPLQ7Z5K2 1190 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 REXO1Q8N1G1 1221 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 SECISBP2LQ93073 1101 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 WDR64B1ANS9 1081 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 ISM2Q6H9L7 571 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 GALNT17Q6IS24 598 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 CCDC105Q8IYK2 499 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms