RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 CCDC73Q6ZRK6 1079 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 MMP1P03956 469 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 PKN1Q16512 942 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 SLF2Q8IX21 1173 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 RASGRP4Q8TDF6 673 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 TMEM47Q9BQJ4 181 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 TDRD3Q9H7E2 651 aaKnown RBP23.5■■□□□ 1.35
PRKCD-202ENST00000394729 FRMPD2Q68DX3 1309 aaPredicted RBP23.5■■□□□ 1.35
PRKCD-202ENST00000394729 TIAM2Q8IVF5 1701 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 FGRP09769 529 aa23.5■■□□□ 1.35
PRKCD-202ENST00000394729 APOBEC3HQ6NTF7 200 aaKnown RBP23.5■■□□□ 1.35
PRKCD-202ENST00000394729 ADAMTSL1Q8N6G6 1762 aa23.49■■□□□ 1.35
PRKCD-202ENST00000394729 GRIN1Q05586 938 aa23.49■■□□□ 1.35
PRKCD-202ENST00000394729 UBA5Q9GZZ9 404 aa23.49■■□□□ 1.35
PRKCD-202ENST00000394729 CLRN2A0PK11 232 aa23.49■■□□□ 1.35
PRKCD-202ENST00000394729 YDJCA8MPS7 323 aa23.49■■□□□ 1.35
PRKCD-202ENST00000394729 PCDHB6Q9Y5E3 794 aa23.49■■□□□ 1.35
PRKCD-202ENST00000394729 AKR1B1P15121 316 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 HMGB2P26583 209 aaKnown RBP23.48■■□□□ 1.35
PRKCD-202ENST00000394729 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
PRKCD-202ENST00000394729 STYK1Q6J9G0 422 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 TMTC3Q6ZXV5 915 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 NOSTRINQ8IVI9 506 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 TRIM44Q96DX7 344 aaPredicted RBP23.48■■□□□ 1.35
PRKCD-202ENST00000394729 BIN1O00499 593 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 GAKO14976 1311 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 PLCG2P16885 1265 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 BRAPQ7Z569 592 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 PODNQ7Z5L7 613 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 TTLL6Q8N841 843 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 RTEL1Q9NZ71 1219 aa23.48■■□□□ 1.35
PRKCD-202ENST00000394729 WNT7AO00755 349 aa23.47■■□□□ 1.35
PRKCD-202ENST00000394729 LARGE2Q8N3Y3 721 aa23.47■■□□□ 1.35
PRKCD-202ENST00000394729 SDF4Q9BRK5 362 aa23.47■■□□□ 1.35
PRKCD-202ENST00000394729 LUZP1Q86V48 1076 aa23.47■■□□□ 1.35
PRKCD-202ENST00000394729 KINO60870 393 aaKnown RBP23.46■■□□□ 1.35
PRKCD-202ENST00000394729 FUT2Q10981 343 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 DACT2Q5SW24 774 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 PDILTQ8N807 584 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 WASF1Q92558 559 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 DNAJC25Q9H1X3 360 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 SCN9AQ15858 1988 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 TOB1P50616 345 aaPredicted RBP23.46■■□□□ 1.35
PRKCD-202ENST00000394729 HEATR3Q7Z4Q2 680 aa23.46■■□□□ 1.35
PRKCD-202ENST00000394729 NLRP5P59047 1200 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 TYRO3Q06418 890 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 ANO6Q4KMQ2 910 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 C7orf43Q8WVR3 580 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 CNTNAP5Q8WYK1 1306 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 DDTLA6NHG4 134 aaPredicted RBP23.45■■□□□ 1.34
PRKCD-202ENST00000394729 SNW1Q13573 536 aaKnown RBP23.45■■□□□ 1.34
PRKCD-202ENST00000394729 C16orf86Q6ZW13 317 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 MRPS27Q92552 414 aaKnown RBP23.45■■□□□ 1.34
PRKCD-202ENST00000394729 CLIP2Q9UDT6 1046 aa23.45■■□□□ 1.34
PRKCD-202ENST00000394729 PCNTO95613 3336 aa23.44■■□□□ 1.34
PRKCD-202ENST00000394729 RNF26Q9BY78 433 aaPredicted RBP23.44■■□□□ 1.34
PRKCD-202ENST00000394729 CLSTN2Q9H4D0 955 aa23.44■■□□□ 1.34
PRKCD-202ENST00000394729 POLR3EQ9NVU0 708 aa23.44■■□□□ 1.34
PRKCD-202ENST00000394729 SERPINB13Q9UIV8 391 aa23.44■■□□□ 1.34
PRKCD-202ENST00000394729 TCP10L2B9ZVM9 353 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 CCDC192P0DO97 292 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 PCP11498 1178 aaKnown RBP23.43■■□□□ 1.34
PRKCD-202ENST00000394729 SLC35G1Q2M3R5 365 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 PIK3AP1Q6ZUJ8 805 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 FAM163AQ96GL9 167 aaPredicted RBP23.43■■□□□ 1.34
PRKCD-202ENST00000394729 PRMT6Q96LA8 375 aaPredicted RBP23.43■■□□□ 1.34
PRKCD-202ENST00000394729 USP17L5A8MUK1 530 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 CYTH3O43739 400 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 DDAH1O94760 285 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 GDF11O95390 407 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 ZNF174Q15697 407 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 SAMD1Q6SPF0 538 aaPredicted RBP23.43■■□□□ 1.34
PRKCD-202ENST00000394729 GPCPD1Q9NPB8 672 aa23.43■■□□□ 1.34
PRKCD-202ENST00000394729 U2AF2P26368 475 aaKnown RBP eCLIP23.42■■□□□ 1.34
PRKCD-202ENST00000394729 SASS6Q6UVJ0 657 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 KCNG4Q8TDN1 519 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 KIAA1551Q9HCM1 1747 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 CALM1P0DP23 149 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 CALM2P0DP24 149 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 CALM3P0DP25 149 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 RBM26Q5T8P6 1007 aaKnown RBP23.42■■□□□ 1.34
PRKCD-202ENST00000394729 TYW1BQ6NUM6 668 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 OSBPL5Q9H0X9 879 aaPredicted RBP23.42■■□□□ 1.34
PRKCD-202ENST00000394729 DDX19AQ9NUU7 478 aaKnown RBP23.42■■□□□ 1.34
PRKCD-202ENST00000394729 RBM28Q9NW13 759 aaKnown RBP23.42■■□□□ 1.34
PRKCD-202ENST00000394729 MAD2L2Q9UI95 211 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 STK36Q9NRP7 1315 aa23.42■■□□□ 1.34
PRKCD-202ENST00000394729 KLRF2D3W0D1 207 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 PFKFB1P16118 471 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 KIAA2012Q0VF49 1180 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 STRIP1Q5VSL9 837 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 SHTN1A0MZ66 631 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 XBP1P17861 261 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 KCNA3P22001 575 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 FAM160A1Q05DH4 1040 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 ADALQ6DHV7 355 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 DGKHQ86XP1 1220 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 PRPF3O43395 683 aaKnown RBP23.41■■□□□ 1.34
PRKCD-202ENST00000394729 SCG2P13521 617 aa23.41■■□□□ 1.34
PRKCD-202ENST00000394729 SLC16A2P36021 539 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms