RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 TNNI1P19237 187 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 IRX4P78413 519 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 CTDSPL2Q05D32 466 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 KLHL30Q0D2K2 578 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SLC12A1Q13621 1099 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 CWF19L2Q2TBE0 894 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 TTC19Q6DKK2 380 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SMAP1Q8IYB5 467 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 MICAL1Q8TDZ2 1067 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 AZI2Q9H6S1 392 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SH2D4AQ9H788 454 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 KCNH3Q9ULD8 1083 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SYNJ2BP-COX16A0A087WUM0 186 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 EXOC3O60645 756 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 APOEP02649 317 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 NLRP12P59046 1061 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 HDAC1Q13547 482 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 KRT71Q3SY84 523 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 MUM1L1Q5H9M0 696 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 FAM102BQ5T8I3 360 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 U2AF1L4Q8WU68 220 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SDCCAG3Q96C92 435 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 RAB20Q9NX57 234 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 COX16Q9P0S2 106 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 BAG5Q9UL15 447 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 RTCBQ9Y3I0 505 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 RPS6KB1P23443 525 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 PHBP35232 272 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 PPP1R2P41236 205 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ANKRD2Q9GZV1 360 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ANLNQ9NQW6 1124 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SMYD2Q9NRG4 433 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 IRAK4Q9NWZ3 460 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 DNM3Q9UQ16 869 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 RNF40O75150 1001 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 CTNNA1P35221 906 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ECE1P42892 770 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ATP1A2P50993 1020 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 TUBB2AQ13885 445 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 BRDTQ58F21 947 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ANO1Q5XXA6 986 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 KSR2Q6VAB6 950 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 RRAGAQ7L523 313 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 RNF169Q8NCN4 708 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 TUBB2BQ9BVA1 445 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 NUCKS1Q9H1E3 243 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 PARP2Q9UGN5 583 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 MAGED2Q9UNF1 606 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ACEP12821 1306 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ABCC5O15440 1437 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 BUB1O43683 1085 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 DEXIO95424 95 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ABCB4P21439 1286 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 ADCY8P40145 1251 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 VPS41P49754 854 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 DNM2P50570 870 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 YARSP54577 528 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 GNGT1P63211 74 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SESTD1Q86VW0 696 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 UHMK1Q8TAS1 419 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 P3H4Q92791 437 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 SNX21Q969T3 373 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 TRIM4Q9C037 500 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 CBX8Q9HC52 389 aa6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 OLA1Q9NTK5 396 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 AATFQ9NY61 560 aaKnown RBP eCLIP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 V9GY48 417 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-206ENST00000394104 CSPG5O95196 566 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 PEX19P40855 299 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 TCP10Q12799 353 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 MAP3K21Q5TCX8 1036 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 EYA3Q99504 573 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 RAB17Q9H0T7 212 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 Q9H521 79 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 UFL1O94874 794 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 MAGEA1P43355 309 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 CYP2J2P51589 502 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 PPFIA1Q13136 1202 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 BRD3Q15059 726 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 HERC4Q5GLZ8 1057 aaPredicted RBP6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 TPTE2Q6XPS3 522 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 CABP7Q86V35 215 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 TPH2Q8IWU9 490 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 CPXCR1Q8N123 301 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 ZNF710Q8N1W2 664 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 C8orf58Q8NAV2 365 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 FAM71BQ8TC56 605 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 MMS19Q96T76 1030 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 AMFRQ9UKV5 643 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 CAPN9O14815 690 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 ZBED4O75132 1171 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 ATF7P17544 494 aaPredicted RBP6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 MAP2K2P36507 400 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 ZNF75DP51815 510 aa6.26□□□□□ -1.41
GAPVD1-206ENST00000394104 RAPH1Q70E73 1250 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms