RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 AMOTL1Q8IY63 956 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 DRC7Q8IY82 874 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
MKS1-203ENST00000393120 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
MKS1-203ENST00000393120 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 FAM13BQ9NYF5 915 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 PCDHB6Q9Y5E3 794 aa16.43■□□□□ 0.22
MKS1-203ENST00000393120 SMTNL1A8MU46 457 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 NMT2O60551 498 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 PTGS1P23219 599 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 GRIK5Q16478 980 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
MKS1-203ENST00000393120 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
MKS1-203ENST00000393120 A0A087WWV3 80 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 TRIM75PA6NK02 468 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 IKBKBO14920 756 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 PLCG2P16885 1265 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 TFAP4Q01664 338 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 TBC1D16Q8TBP0 767 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 MDM2Q00987 491 aaPredicted RBP16.41■□□□□ 0.22
MKS1-203ENST00000393120 NPY5RQ15761 445 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 CNNM3Q8NE01 707 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 ZNF287Q9HBT7 754 aa16.41■□□□□ 0.22
MKS1-203ENST00000393120 NEMFO60524 1076 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 TRIM37O94972 964 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 SCG2P13521 617 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
MKS1-203ENST00000393120 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
MKS1-203ENST00000393120 PROM2Q8N271 834 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
MKS1-203ENST00000393120 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 POLLQ9UGP5 575 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 PYCARDQ9ULZ3 195 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 FAM205AQ6ZU69 1335 aa16.4■□□□□ 0.22
MKS1-203ENST00000393120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.39■□□□□ 0.21
MKS1-203ENST00000393120 GNAQP50148 359 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 TPM4P67936 248 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 NCAPHQ15003 741 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 KANK3Q6NY19 840 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 TGFBRAP1Q8WUH2 860 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 SH3GLB2Q9NR46 395 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 R3HCC1Q9Y3T6 440 aaKnown RBP16.39■□□□□ 0.21
MKS1-203ENST00000393120 BIN1O00499 593 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 MYO1BO43795 1136 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 TRAPPC10P48553 1259 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.21
MKS1-203ENST00000393120 FERMT2Q96AC1 680 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 GAKO14976 1311 aa16.39■□□□□ 0.21
MKS1-203ENST00000393120 BTDP43251 543 aa16.38■□□□□ 0.21
MKS1-203ENST00000393120 GRIN1Q05586 938 aa16.38■□□□□ 0.21
MKS1-203ENST00000393120 PNOCQ13519 176 aa16.38■□□□□ 0.21
MKS1-203ENST00000393120 GRM4Q14833 912 aa16.38■□□□□ 0.21
MKS1-203ENST00000393120 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
MKS1-203ENST00000393120 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
MKS1-203ENST00000393120 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
MKS1-203ENST00000393120 SUGT1Q9Y2Z0 365 aa16.38■□□□□ 0.21
MKS1-203ENST00000393120 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 ATP6V0A2Q9Y487 856 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 PCDHA5Q9Y5H7 936 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 CALML3P27482 149 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 SARSP49591 514 aaKnown RBP16.37■□□□□ 0.21
MKS1-203ENST00000393120 PLCD1P51178 756 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 EARS2Q5JPH6 523 aaKnown RBP16.37■□□□□ 0.21
MKS1-203ENST00000393120 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 C16orf86Q6ZW13 317 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 FBXW7Q969H0 707 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 CSRNP2Q9H175 543 aa16.37■□□□□ 0.21
MKS1-203ENST00000393120 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
MKS1-203ENST00000393120 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
MKS1-203ENST00000393120 PLSCR1O15162 318 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 POLR2DO15514 142 aaKnown RBP16.36■□□□□ 0.21
MKS1-203ENST00000393120 RASA1P20936 1047 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 RHBDL3P58872 404 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 POSTNQ15063 836 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 MAPKAPK5Q8IW41 473 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 LRRC8AQ8IWT6 810 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 TRIML1Q8N9V2 468 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
MKS1-203ENST00000393120 LZTS2Q9BRK4 669 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms