RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 PPARAQ07869 468 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 MSL3Q8N5Y2 521 aaKnown RBP17.12■□□□□ 0.33
SHTN1-204ENST00000392903 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 MYO1BO43795 1136 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 GUCY1A2P33402 732 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 GNG11P61952 73 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-204ENST00000392903 GOLGA6L1Q8N7Z2 621 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 DPF2Q92785 391 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 COL5A3P25940 1745 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-204ENST00000392903 ZNF804BA4D1E1 1349 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 RPS6KA5O75582 802 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 WDHD1O75717 1129 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-204ENST00000392903 WTAPQ15007 396 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 HNRNPLLQ8WVV9 542 aaKnown RBP17.11■□□□□ 0.33
SHTN1-204ENST00000392903 SERPINC1P01008 464 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 TOP1P11387 765 aaKnown RBP17.11■□□□□ 0.33
SHTN1-204ENST00000392903 MYL5Q02045 173 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
SHTN1-204ENST00000392903 TRIM29Q14134 588 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 LEKR1Q6ZMV7 388 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
SHTN1-204ENST00000392903 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-204ENST00000392903 ERICH2A1L162 156 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 ZPR1O75312 459 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 SART3Q15020 963 aaKnown RBP17.1■□□□□ 0.33
SHTN1-204ENST00000392903 CFAP100Q494V2 611 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 NOM1Q5C9Z4 860 aaKnown RBP17.1■□□□□ 0.33
SHTN1-204ENST00000392903 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 RPS8P62241 208 aaKnown RBP17.1■□□□□ 0.33
SHTN1-204ENST00000392903 VPS72Q15906 364 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
SHTN1-204ENST00000392903 ZNF384Q8TF68 577 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 LAMB2P55268 1798 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 EP400Q96L91 3159 aa17.1■□□□□ 0.33
SHTN1-204ENST00000392903 PRDM1O75626 825 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 CMA1P23946 247 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 SLC39A14Q15043 492 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
SHTN1-204ENST00000392903 ICE2Q659A1 982 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
SHTN1-204ENST00000392903 UBAC1Q9BSL1 405 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 STX10O60499 249 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 TBX2Q13207 712 aaPredicted RBP17.09■□□□□ 0.33
SHTN1-204ENST00000392903 BCORQ6W2J9 1755 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
SHTN1-204ENST00000392903 RPS6KA4O75676 772 aa17.08■□□□□ 0.33
SHTN1-204ENST00000392903 PFKFB1P16118 471 aa17.08■□□□□ 0.33
SHTN1-204ENST00000392903 RTN1Q16799 776 aa17.08■□□□□ 0.33
SHTN1-204ENST00000392903 BAG1Q99933 345 aaPredicted RBP17.08■□□□□ 0.33
SHTN1-204ENST00000392903 GEMIN8Q9NWZ8 242 aaKnown RBP17.08■□□□□ 0.33
SHTN1-204ENST00000392903 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.33
SHTN1-204ENST00000392903 BAZ2AQ9UIF9 1905 aaKnown RBP17.08■□□□□ 0.32
SHTN1-204ENST00000392903 BTBD18B2RXH4 712 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.32
SHTN1-204ENST00000392903 MAGEA9P43362 315 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 USP5P45974 858 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 EVX2Q03828 476 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 GOLGA8FQ08AF8 430 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 GOLGA8DPQ0D2H9 430 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 ISM2Q6H9L7 571 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 DHX58Q96C10 678 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 CLIC6Q96NY7 704 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
SHTN1-204ENST00000392903 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.32
SHTN1-204ENST00000392903 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
SHTN1-204ENST00000392903 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 IFNAR1P17181 557 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 BEND6Q5SZJ8 279 aaPredicted RBP17.07■□□□□ 0.32
SHTN1-204ENST00000392903 HDXQ7Z353 690 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 GTF2A1P52655 376 aaPredicted RBP17.07■□□□□ 0.32
SHTN1-204ENST00000392903 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 FANCBQ8NB91 859 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 ARHGEF1Q92888 912 aaKnown RBP17.07■□□□□ 0.32
SHTN1-204ENST00000392903 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 VPS18Q9P253 973 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 TNKSO95271 1327 aa17.07■□□□□ 0.32
SHTN1-204ENST00000392903 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
SHTN1-204ENST00000392903 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 MAP3K14Q99558 947 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 NYXQ9GZU5 481 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms