RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 C2CD5Q86YS7 1000 aa23.16■■□□□ 1.3
PTPN11-202ENST00000392597 MAPKAPK5Q8IW41 473 aa23.16■■□□□ 1.3
PTPN11-202ENST00000392597 PPP1R1BQ9UD71 204 aaPredicted RBP23.16■■□□□ 1.3
PTPN11-202ENST00000392597 BTBD18B2RXH4 712 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 KIF5BP33176 963 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 PKN1Q16512 942 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 RILPL1Q5EBL4 403 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 STYK1Q6J9G0 422 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 EYA3Q99504 573 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 RIMBP2O15034 1052 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 PLEKHA8P1O95397 391 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 ZNF444Q8N0Y2 327 aaPredicted RBP23.15■■□□□ 1.3
PTPN11-202ENST00000392597 DYNLL2Q96FJ2 89 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 KCNJ14Q9UNX9 436 aa23.15■■□□□ 1.3
PTPN11-202ENST00000392597 FLT1P17948 1338 aa23.14■■□□□ 1.3
PTPN11-202ENST00000392597 CNTNAP5Q8WYK1 1306 aa23.14■■□□□ 1.3
PTPN11-202ENST00000392597 MYH1P12882 1939 aa23.14■■□□□ 1.3
PTPN11-202ENST00000392597 KAT14Q9H8E8 782 aa23.14■■□□□ 1.29
PTPN11-202ENST00000392597 CHRNA5P30532 468 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 PLCD1P51178 756 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 NDUFA8P51970 172 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 C16orf86Q6ZW13 317 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 IL17RBQ9NRM6 502 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 DAGLAQ9Y4D2 1042 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 TSPY3P0CV98 308 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 TSPY8P0CW00 308 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 RASA1P20936 1047 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 ANO6Q4KMQ2 910 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 PHF20Q9BVI0 1012 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 RRAGDQ9NQL2 400 aaPredicted RBP23.13■■□□□ 1.29
PTPN11-202ENST00000392597 USP25Q9UHP3 1055 aa23.13■■□□□ 1.29
PTPN11-202ENST00000392597 V9GY48 417 aaPredicted RBP23.13■■□□□ 1.29
PTPN11-202ENST00000392597 FAM237AA0A1B0GTK4 181 aa23.12■■□□□ 1.29
PTPN11-202ENST00000392597 A0A1B0GVL5 298 aa23.12■■□□□ 1.29
PTPN11-202ENST00000392597 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
PTPN11-202ENST00000392597 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
PTPN11-202ENST00000392597 SAP30BPQ9UHR5 308 aaKnown RBP23.12■■□□□ 1.29
PTPN11-202ENST00000392597 MORC2Q9Y6X9 1032 aaPredicted RBP23.12■■□□□ 1.29
PTPN11-202ENST00000392597 CUTAO60888 179 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 WDHD1O75717 1129 aaPredicted RBP23.11■■□□□ 1.29
PTPN11-202ENST00000392597 DPEP1P16444 411 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 SLC4A8Q2Y0W8 1093 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 ZSCAN30Q86W11 494 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 SRBD1Q8N5C6 995 aaKnown RBP23.11■■□□□ 1.29
PTPN11-202ENST00000392597 ZNF622Q969S3 477 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTPN11-202ENST00000392597 RTN4Q9NQC3 1192 aaKnown RBP23.11■■□□□ 1.29
PTPN11-202ENST00000392597 KCNA3P22001 575 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 STX1AQ16623 288 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 PNMA1Q8ND90 353 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 CNKSR1Q969H4 720 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
PTPN11-202ENST00000392597 BRCA1P38398 1863 aaKnown RBP23.11■■□□□ 1.29
PTPN11-202ENST00000392597 MARCKSP29966 332 aaPredicted RBP23.1■■□□□ 1.29
PTPN11-202ENST00000392597 KRT2P35908 639 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 CDK8P49336 464 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 GNAQP50148 359 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 TOB1P50616 345 aaPredicted RBP23.1■■□□□ 1.29
PTPN11-202ENST00000392597 OLFM4Q6UX06 510 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 PODNQ7Z5L7 613 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 TIGD1Q96MW7 591 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 BRMS1Q9HCU9 246 aa23.1■■□□□ 1.29
PTPN11-202ENST00000392597 PFKFB1P16118 471 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 CERS5Q8N5B7 392 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 SDF4Q9BRK5 362 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 CBX8Q9HC52 389 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 VPS54Q9P1Q0 977 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 CEP131Q9UPN4 1083 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 SNED1Q8TER0 1413 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 ADCY5O95622 1261 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 NR5A1Q13285 461 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 GRM4Q14833 912 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 RESP18Q5W5W9 173 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 SLC44A5Q8NCS7 719 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 SHISA4Q96DD7 197 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 HPSEQ9Y251 543 aa23.09■■□□□ 1.29
PTPN11-202ENST00000392597 G3V3G9 751 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 ZNF202O95125 648 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 CLCN1P35523 988 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 ZNF165P49910 485 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 DCAF8Q5TAQ9 597 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 HHIPL2Q6UWX4 724 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 KRI1Q8N9T8 703 aaKnown RBP23.08■■□□□ 1.29
PTPN11-202ENST00000392597 NEDD1Q8NHV4 660 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 OXER1Q8TDS5 423 aa23.08■■□□□ 1.29
PTPN11-202ENST00000392597 TTF2Q9UNY4 1162 aaKnown RBP23.08■■□□□ 1.29
PTPN11-202ENST00000392597 USP17L3A6NCW0 530 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 USP17L4A6NCW7 530 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 SCG2P13521 617 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 FKBP1AP62942 108 aaKnown RBP23.07■■□□□ 1.28
PTPN11-202ENST00000392597 PFKFB3Q16875 520 aaPredicted RBP23.07■■□□□ 1.28
PTPN11-202ENST00000392597 DOK7Q18PE1 504 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 USP17L1Q7RTZ2 530 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 FBXW7Q969H0 707 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 ANO10Q9NW15 660 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 PIM2Q9P1W9 311 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 NOL7Q9UMY1 257 aaKnown RBP23.07■■□□□ 1.28
PTPN11-202ENST00000392597 UTRNP46939 3433 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 SHC4Q6S5L8 630 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 TTLL6Q8N841 843 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms