RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 EARS2Q5JPH6 523 aaKnown RBP14.07□□□□□ -0.16
RFC5-201ENST00000392542 USP49Q70CQ1 688 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 GRAMD1CQ8IYS0 662 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 PDILTQ8N807 584 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 ENOX1Q8TC92 643 aaKnown RBP14.07□□□□□ -0.16
RFC5-201ENST00000392542 NYXQ9GZU5 481 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 TMX1Q9H3N1 280 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 BRMS1Q9HCU9 246 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 CCDC88AQ3V6T2 1871 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 CNTNAP5Q8WYK1 1306 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 BMP15O95972 392 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 FMR1Q06787 632 aaKnown RBP eCLIP14.06□□□□□ -0.16
RFC5-201ENST00000392542 NAA30Q147X3 362 aaPredicted RBP14.06□□□□□ -0.16
RFC5-201ENST00000392542 SPATA20Q8TB22 786 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 CRNKL1Q9BZJ0 848 aaKnown RBP14.06□□□□□ -0.16
RFC5-201ENST00000392542 ANKRD2Q9GZV1 360 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 CGNQ9P2M7 1197 aaKnown RBP14.06□□□□□ -0.16
RFC5-201ENST00000392542 KIAA1551Q9HCM1 1747 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 ZNF18P17022 549 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 HIBADHP31937 336 aaKnown RBP14.06□□□□□ -0.16
RFC5-201ENST00000392542 ZNF827Q17R98 1081 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 ERO1AQ96HE7 468 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 CCDC34Q96HJ3 373 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 NLRP3Q96P20 1036 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 DCP1AQ9NPI6 582 aaPredicted RBP14.06□□□□□ -0.16
RFC5-201ENST00000392542 NARFQ9UHQ1 456 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 ZNF215Q9UL58 517 aaPredicted RBP14.06□□□□□ -0.16
RFC5-201ENST00000392542 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
RFC5-201ENST00000392542 KCNQ4P56696 695 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 TNFRSF25Q93038 417 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 FERMT2Q96AC1 680 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 ATP8A2Q9NTI2 1148 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 SLU7O95391 586 aaKnown RBP14.05□□□□□ -0.16
RFC5-201ENST00000392542 PLCD1P51178 756 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 TBX2Q13207 712 aaPredicted RBP14.05□□□□□ -0.16
RFC5-201ENST00000392542 NPY5RQ15761 445 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 CTCFLQ8NI51 663 aaPredicted RBP14.05□□□□□ -0.16
RFC5-201ENST00000392542 DHX58Q96C10 678 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
RFC5-201ENST00000392542 A0A087X0B3 334 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 EVX2Q03828 476 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 SBK1Q52WX2 424 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 SYT10Q6XYQ8 523 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 SMIM5Q71RC9 77 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 FCHSD1Q86WN1 690 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 SMAP1Q8IYB5 467 aaPredicted RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 L2HGDHQ9H9P8 463 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 ARPP21Q9UBL0 812 aaPredicted RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 ERCC5P28715 1186 aaPredicted RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 FAM98CQ17RN3 349 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 CT47A1Q5JQC4 288 aaPredicted RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 NBPF5PQ86XG9 351 aaPredicted RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 TRMT44Q8IYL2 757 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 SRBD1Q8N5C6 995 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 SYMPKQ92797 1274 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 EPSTI1Q96J88 318 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
RFC5-201ENST00000392542 SRP68Q9UHB9 627 aaKnown RBP14.04□□□□□ -0.16
RFC5-201ENST00000392542 WNT7AO00755 349 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 RPS6KA4O75676 772 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 SLFN14P0C7P3 912 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 PRDX5P30044 214 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 GOLGA8FQ08AF8 430 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 GOLGA8DPQ0D2H9 430 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 PTPN21Q16825 1174 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 HSP90AA4PQ58FG1 418 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 MED15Q96RN5 788 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 LTBP4Q8N2S1 1624 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 ZBTB22O15209 634 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 NMT2O60551 498 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 CYP2D6P10635 497 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 ZNF174Q15697 407 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
RFC5-201ENST00000392542 FAM47AQ5JRC9 791 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 TMEM139Q8IV31 216 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 FEZ1Q99689 392 aa14.03□□□□□ -0.16
RFC5-201ENST00000392542 ARHGAP6O43182 974 aa14.02□□□□□ -0.16
RFC5-201ENST00000392542 CBX1P83916 185 aa14.02□□□□□ -0.16
RFC5-201ENST00000392542 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.16
RFC5-201ENST00000392542 PAGE5Q96GU1 130 aa14.02□□□□□ -0.16
RFC5-201ENST00000392542 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.17
RFC5-201ENST00000392542 SCG2P13521 617 aa14.02□□□□□ -0.17
RFC5-201ENST00000392542 AFMP43652 599 aa14.02□□□□□ -0.17
RFC5-201ENST00000392542 ETF1P62495 437 aaKnown RBP14.02□□□□□ -0.17
RFC5-201ENST00000392542 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
RFC5-201ENST00000392542 HOMER1Q86YM7 354 aa14.02□□□□□ -0.17
RFC5-201ENST00000392542 REXO1L1PQ8IX06 675 aa14.02□□□□□ -0.17
RFC5-201ENST00000392542 SAMSN1Q9NSI8 373 aaKnown RBP14.02□□□□□ -0.17
RFC5-201ENST00000392542 IRS2Q9Y4H2 1338 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 ZSCAN12O43309 604 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 ZPR1O75312 459 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 PFKFB3Q16875 520 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms