RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 MFSD14BQ5SR56 506 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 IFT20Q8IY31 132 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 CCDC89Q8N998 374 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 ZNF532Q9HCE3 1301 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 SFMBT2Q5VUG0 894 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 GAS7O60861 476 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 DNM2P50570 870 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 GPATCH11Q8N954 259 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 KDM3AQ9Y4C1 1321 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 KIAA0232Q92628 1395 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 DAPK3O43293 454 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 TIMM10P62072 90 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 CCDC94Q9BW85 323 aaPredicted RBP13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 CHL1O00533 1208 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 GCNT3O95395 438 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 STMN2Q93045 179 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 ITSN1Q15811 1721 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 TNFAIP1Q13829 316 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 MYCT1Q8N699 235 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 SGSM2O43147 1006 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 HERC4Q5GLZ8 1057 aaPredicted RBP13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 ZNF75DP51815 510 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 CTSWP56202 376 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 FANCCQ00597 558 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 MAPK8IP1Q9UQF2 711 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 B4GALNT4Q76KP1 1039 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 AFAP1L1Q8TED9 768 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
KCNQ3-201ENST00000388996 ZNF408Q9H9D4 720 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 IFIH1Q9BYX4 1025 aaKnown RBP13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 TXKP42681 527 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 TCP10Q12799 353 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 IQCDQ96DY2 449 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 MYL10Q9BUA6 226 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 CTTNBP2NLQ9P2B4 639 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 PTPRTO14522 1441 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 DIS3L2Q8IYB7 885 aaKnown RBP13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 LRWD1Q9UFC0 647 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 EXOC3O60645 756 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 BCRP11274 1271 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 EVCP57679 992 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 ARPP21Q9UBL0 812 aaPredicted RBP13.65□□□□□ -0.22
KCNQ3-201ENST00000388996 CCDC62Q6P9F0 684 aa13.65□□□□□ -0.23
KCNQ3-201ENST00000388996 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.23
KCNQ3-201ENST00000388996 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 RAD51AP2Q09MP3 1159 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 ASIC3Q9UHC3 531 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 KRT40Q6A162 431 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 VPS16Q9H269 839 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 NLRP12P59046 1061 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 CARD10Q9BWT7 1032 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 HACE1Q8IYU2 909 aa13.64□□□□□ -0.23
KCNQ3-201ENST00000388996 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 SLC5A4Q9NY91 659 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 GIPC1O14908 333 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 SMCR8Q8TEV9 937 aaPredicted RBP13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 NT5C3AQ9H0P0 336 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 PEX26Q7Z412 305 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 TMTC1Q8IUR5 882 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 CPXCR1Q8N123 301 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 ZNF526Q8TF50 670 aaPredicted RBP13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 ERO1AQ96HE7 468 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 NFE2L3Q9Y4A8 694 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 PPARAQ07869 468 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 PPIP5K2O43314 1243 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
KCNQ3-201ENST00000388996 KRT19P08727 400 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms