RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 PCOLCE2Q9UKZ9 415 aa6.83□□□□□ -1.32
RNU6-549P-201ENST00000384433 ZNF214Q9UL59 606 aaPredicted RBP6.83□□□□□ -1.32
RNU6-549P-201ENST00000384433 DAGLAQ9Y4D2 1042 aa6.83□□□□□ -1.32
RNU6-549P-201ENST00000384433 KRBA1A5PL33 1030 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 PIK3R2O00459 728 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 TP53P04637 393 aaPredicted RBP6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 CAP2P40123 477 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 RASGRF1Q13972 1273 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 FOXQ1Q9C009 403 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 SEMA6CQ9H3T2 930 aa6.82□□□□□ -1.32
RNU6-549P-201ENST00000384433 CNTNAP4Q9C0A0 1308 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 COL17A1Q9UMD9 1497 aaPredicted RBP6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 C9orf172C9J069 976 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 SART1O43290 800 aaKnown RBP6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 GBP1P32455 592 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 USP11P51784 963 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 GNPTABQ3T906 1256 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 SEZ6L2Q6UXD5 910 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 DNAJB8Q8NHS0 232 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 CYB5D2Q8WUJ1 264 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 CCDC74BQ96LY2 380 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 PSMG3-AS1Q96PY0 264 aa6.81□□□□□ -1.32
RNU6-549P-201ENST00000384433 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 GAS2O43903 313 aaKnown RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 LRIG2O94898 1065 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 SLITRK5O94991 958 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 APBA3O96018 575 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 PMS1P54277 932 aaKnown RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 SLC7A5Q01650 507 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 NRG1Q02297 640 aaPredicted RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 CDK5R2Q13319 367 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 AXDND1Q5T1B0 1012 aaPredicted RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 EGFLAMQ63HQ2 1017 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 CDH24Q86UP0 819 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 KCT2Q8NC54 265 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 LGR4Q9BXB1 951 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 PHAXQ9H814 394 aaKnown RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 SUSD2Q9UGT4 822 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 ZMYM5Q9UJ78 669 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 LEMD3Q9Y2U8 911 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 SLC12A7Q9Y666 1083 aa6.8□□□□□ -1.32
RNU6-549P-201ENST00000384433 ESYT3A0FGR9 886 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 BMP3P12645 472 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 CHRNA4P43681 627 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 SQSTM1Q13501 440 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 MTERF2Q49AM1 385 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 DZIP1LQ8IYY4 767 aaKnown RBP6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 SHISA5Q8N114 240 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 EZH1Q92800 747 aaPredicted RBP6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 MIPEPQ99797 713 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 CEP41Q9BYV8 373 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 C1GALT1Q9NS00 363 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 SBNO2Q9Y2G9 1366 aa6.79□□□□□ -1.32
RNU6-549P-201ENST00000384433 SUSD5O60279 629 aa6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 LEFTY1O75610 366 aa6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 MAP4P27816 1152 aaKnown RBP6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 IFRD2Q12894 506 aaPredicted RBP6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 SLC10A6Q3KNW5 377 aa6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 UTP4Q969X6 686 aaKnown RBP6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 VWCEQ96DN2 955 aa6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 MYRFLQ96LU7 910 aa6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 CEP131Q9UPN4 1083 aa6.78□□□□□ -1.32
RNU6-549P-201ENST00000384433 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
RNU6-549P-201ENST00000384433 CBFA2T2O43439 604 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 LRRN2O75325 713 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 CLEC3AO75596 197 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 EPHX1P07099 455 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 RXRBP28702 533 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 NCAPHQ15003 741 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 LETMD1Q6P1Q0 360 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 FAM20CQ8IXL6 584 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 MFSD2AQ8NA29 543 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 FGD4Q96M96 766 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 NACC1Q96RE7 527 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU6-549P-201ENST00000384433 SHOXO15266 292 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 EOMESO95936 686 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 FAM153BP0C7A2 387 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 CCNFP41002 786 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 SSRP1Q08945 709 aaKnown RBP6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 NBPF12Q5TAG4 269 aaPredicted RBP6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 EEPD1Q7L9B9 569 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 CD163Q86VB7 1156 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 TXNRD3Q86VQ6 643 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 TOP6BLQ8N6T0 577 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 ZNF513Q8N8E2 541 aaPredicted RBP6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 ST13P5Q8NFI4 369 aaPredicted RBP6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 KREMEN1Q96MU8 473 aa6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
RNU6-549P-201ENST00000384433 PRDM10Q9NQV6 1147 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms