RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 IGKV6D-41A0A0C4DH26 115 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 TTLL1O95922 423 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 EPS15P42566 896 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 TRIM22Q8IYM9 498 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 NSUN7Q8NE18 718 aaKnown RBP10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 WASF1Q92558 559 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 DCPSQ96C86 337 aaKnown RBP10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 LZTS2Q9BRK4 669 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 TMEM39BQ9GZU3 492 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 DEFB129Q9H1M3 183 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 STX8Q9UNK0 236 aa10.32□□□□□ -0.76
RNU1-28P-201ENST00000383861 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 EGFRP00533 1210 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 AKR1B1P15121 316 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 IFNAR1P17181 557 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 SSRP1Q08945 709 aaKnown RBP10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 ST3GAL1Q11201 340 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 TROAPQ12815 778 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 SUPT20HL1Q3ZLR7 823 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 ANGEL2Q5VTE6 544 aaKnown RBP10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 RCSD1Q6JBY9 416 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 PNMA8AQ86V59 439 aaPredicted RBP10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 PNMA1Q8ND90 353 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 TRPM4Q8TD43 1214 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 TMEM47Q9BQJ4 181 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 DNAJC18Q9H819 358 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 STK36Q9NRP7 1315 aa10.31□□□□□ -0.76
RNU1-28P-201ENST00000383861 STX6O43752 255 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 NMT2O60551 498 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 SMARCA1P28370 1054 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 EPHX2P34913 555 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 AKAP17AQ02040 695 aaKnown RBP10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 MKL1Q969V6 931 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 TEPSINQ96N21 525 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 NCOA5Q9HCD5 579 aaKnown RBP10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 ARHGEF10LQ9HCE6 1279 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 GGA3Q9NZ52 723 aa10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 ORC3Q9UBD5 711 aaPredicted RBP10.3□□□□□ -0.76
RNU1-28P-201ENST00000383861 H3BQV1 296 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 CTNND1O60716 968 aaKnown RBP10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 CTDNEP1O95476 244 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 ASNSP08243 561 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 XBP1P17861 261 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 SYT1P21579 422 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 CDC27P30260 824 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 ADD1P35611 737 aaKnown RBP10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 CAP2P40123 477 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 GRM4Q14833 912 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 MYL10Q9BUA6 226 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 ZNF341Q9BYN7 854 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
RNU1-28P-201ENST00000383861 DEXIO95424 95 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 BRD1O95696 1058 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 GH2P01242 217 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 RXRAP19793 462 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 NF2P35240 595 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 ICA1Q05084 483 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 TRIM29Q14134 588 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 NTRK3Q16288 839 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 GPATCH4Q5T3I0 446 aaKnown RBP10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 CCDC144CPQ8IYA2 1237 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
RNU1-28P-201ENST00000383861 PALM3A6NDB9 673 aaPredicted RBP10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 JAK2O60674 1132 aa10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 EEF2P13639 858 aaKnown RBP10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 PTMSP20962 102 aa10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
RNU1-28P-201ENST00000383861 SEPT2Q15019 361 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms