RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 NMT2O60551 498 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 MCCP23508 829 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 SPP2Q13103 211 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 KRT32Q14532 448 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
PDGFB-202ENST00000381551 CAPNS2Q96L46 248 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 AS3MTQ9HBK9 375 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 KCNH4Q9UQ05 1017 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 PLIN4Q96Q06 1357 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
PDGFB-202ENST00000381551 CXCL11O14625 94 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 EEF2P13639 858 aaKnown RBP18.25■□□□□ 0.51
PDGFB-202ENST00000381551 ECE1P42892 770 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 NOVP48745 357 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
PDGFB-202ENST00000381551 CYB5R4Q7L1T6 521 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 RALYLQ86SE5 291 aaKnown RBP18.25■□□□□ 0.51
PDGFB-202ENST00000381551 CLEC10AQ8IUN9 316 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 MB21D2Q8IYB1 491 aaPredicted RBP18.25■□□□□ 0.51
PDGFB-202ENST00000381551 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 CEP95Q96GE4 821 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 NYAP2Q9P242 653 aa18.25■□□□□ 0.51
PDGFB-202ENST00000381551 A0A1W2PRG0 241 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 VEGFBP49765 207 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 ICA1Q05084 483 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 GRM1Q13255 1194 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
PDGFB-202ENST00000381551 MKL1Q969V6 931 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 MS4A4AQ96JQ5 239 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 ZKSCAN3Q9BRR0 538 aa18.24■□□□□ 0.51
PDGFB-202ENST00000381551 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
PDGFB-202ENST00000381551 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
PDGFB-202ENST00000381551 USP17L10C9JJH3 530 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 BACE1P56817 501 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 ANAPC15P60006 121 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 CHST3Q7LGC8 479 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 DNAJC5GQ8N7S2 189 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 TTC14Q96N46 770 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 ZSCAN10Q96SZ4 725 aaPredicted RBP18.23■□□□□ 0.51
PDGFB-202ENST00000381551 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 CLIP2Q9UDT6 1046 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 TMX2Q9Y320 296 aa18.23■□□□□ 0.51
PDGFB-202ENST00000381551 C19orf81C9J6K1 198 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 TTLL1O95922 423 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 MCM5P33992 734 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 GTF2A2P52657 109 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 ANTXR2P58335 489 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 EXOSC10Q01780 885 aaKnown RBP18.22■□□□□ 0.51
PDGFB-202ENST00000381551 ATP2B2Q01814 1243 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 KIF23Q02241 960 aaPredicted RBP18.22■□□□□ 0.51
PDGFB-202ENST00000381551 NOGQ13253 232 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 SNAPC2Q13487 334 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
PDGFB-202ENST00000381551 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
PDGFB-202ENST00000381551 C22orf23Q9BZE7 217 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 KIAA1683Q9H0B3 1180 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 ARHGEF10LQ9HCE6 1279 aa18.22■□□□□ 0.51
PDGFB-202ENST00000381551 A0A0G2JLL6 359 aaPredicted RBP18.21■□□□□ 0.51
PDGFB-202ENST00000381551 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
PDGFB-202ENST00000381551 AOC2O75106 756 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
PDGFB-202ENST00000381551 MAP2K2P36507 400 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 MTMR2Q13614 643 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 MOGSQ13724 837 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 SH3D19Q5HYK7 790 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 PRRT2Q7Z6L0 340 aaPredicted RBP18.21■□□□□ 0.51
PDGFB-202ENST00000381551 IGDCC4Q8TDY8 1250 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 MTA3Q9BTC8 594 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 TM6SF1Q9BZW5 370 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 STX8Q9UNK0 236 aa18.21■□□□□ 0.51
PDGFB-202ENST00000381551 MANSC4A6NHS7 340 aaPredicted RBP18.2■□□□□ 0.5
PDGFB-202ENST00000381551 PRC1O43663 620 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 CETPP11597 493 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 PSMA5P28066 241 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 RBM25P49756 843 aaKnown RBP18.2■□□□□ 0.5
PDGFB-202ENST00000381551 USP14P54578 494 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 INHBEP58166 350 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 SEC23AQ15436 765 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 ENAHQ8N8S7 591 aaPredicted RBP18.2■□□□□ 0.5
PDGFB-202ENST00000381551 TMEM47Q9BQJ4 181 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 UBAC1Q9BSL1 405 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 UPF2Q9HAU5 1272 aaKnown RBP18.2■□□□□ 0.5
PDGFB-202ENST00000381551 ZSWIM6Q9HCJ5 1215 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 TNKSO95271 1327 aa18.2■□□□□ 0.5
PDGFB-202ENST00000381551 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms