RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 HMGCRP04035 888 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 MAPK4P31152 587 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 JAG1P78504 1218 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 CCAR1Q8IX12 1150 aaKnown RBP15.7■□□□□ 0.1
RPAIN-202ENST00000381208 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
RPAIN-202ENST00000381208 LRRCC1Q9C099 1032 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 PAG1Q9NWQ8 432 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 ZNF532Q9HCE3 1301 aa15.7■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 ELNP15502 786 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 ZSCAN25Q6NSZ9 544 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 NUDT12Q9BQG2 462 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 UNC93B1Q9H1C4 597 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 PAK6Q9NQU5 681 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-202ENST00000381208 EMILIN3Q9NT22 766 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 MCM9Q9NXL9 1143 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 GJD2Q9UKL4 321 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 CDK5RAP2Q96SN8 1893 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 MYO5AQ9Y4I1 1855 aaKnown RBP15.69■□□□□ 0.1
RPAIN-202ENST00000381208 CEP290O15078 2479 aa15.69■□□□□ 0.1
RPAIN-202ENST00000381208 TCRBV5S4A2TA0A5A2 114 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 FARP2O94887 1054 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-202ENST00000381208 XRCC5P13010 732 aaKnown RBP15.68■□□□□ 0.1
RPAIN-202ENST00000381208 PLCD1P51178 756 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 CCNA1P78396 465 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 GABPAQ06546 454 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 UBE2Q1Q7Z7E8 422 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 HAUS7Q99871 368 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 BOLA2Q9H3K6 86 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 ATP8A2Q9NTI2 1148 aa15.68■□□□□ 0.1
RPAIN-202ENST00000381208 MYH1P12882 1939 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 GLRX3O76003 335 aaKnown RBP15.67■□□□□ 0.1
RPAIN-202ENST00000381208 TFRCP02786 760 aaKnown RBP15.67■□□□□ 0.1
RPAIN-202ENST00000381208 SHMT1P34896 483 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 ADD2P35612 726 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 ERVK-9P63128 1117 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 ERVK-24P63145 666 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 UBE3CQ15386 1083 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 HABP4Q5JVS0 413 aaKnown RBP15.67■□□□□ 0.1
RPAIN-202ENST00000381208 DCP1AQ9NPI6 582 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-202ENST00000381208 RABGAP1Q9Y3P9 1069 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 NR2E3Q9Y5X4 410 aa15.67■□□□□ 0.1
RPAIN-202ENST00000381208 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-202ENST00000381208 LBX2Q6XYB7 198 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 ANKLE1Q8NAG6 615 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 DPF3Q92784 378 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 GPATCH3Q96I76 525 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 DEFB118Q96PH6 123 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 HMX1Q9NP08 348 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-202ENST00000381208 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 RPTORQ8N122 1335 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 DOCK3Q8IZD9 2030 aa15.66■□□□□ 0.1
RPAIN-202ENST00000381208 CATSPERGQ6ZRH7 1159 aa15.65■□□□□ 0.1
RPAIN-202ENST00000381208 TMEM179Q6ZVK1 233 aa15.65■□□□□ 0.1
RPAIN-202ENST00000381208 LCORLQ8N3X6 602 aa15.65■□□□□ 0.1
RPAIN-202ENST00000381208 CCDC17Q96LX7 622 aa15.65■□□□□ 0.1
RPAIN-202ENST00000381208 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
RPAIN-202ENST00000381208 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.65■□□□□ 0.1
RPAIN-202ENST00000381208 CWC22Q9HCG8 908 aaKnown RBP15.65■□□□□ 0.1
RPAIN-202ENST00000381208 TXNRD2Q9NNW7 524 aa15.65■□□□□ 0.1
RPAIN-202ENST00000381208 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 VCAM1P19320 739 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 RGS2P41220 211 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 PLEKHH3Q7Z736 793 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 SDR42E1Q8WUS8 393 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 PAGR1Q9BTK6 254 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 SH2D4AQ9H788 454 aa15.64■□□□□ 0.09
RPAIN-202ENST00000381208 H0YGN5 161 aa15.63■□□□□ 0.09
RPAIN-202ENST00000381208 MPHOSPH10O00566 681 aaKnown RBP15.63■□□□□ 0.09
RPAIN-202ENST00000381208 ZYXQ15942 572 aaKnown RBP15.63■□□□□ 0.09
RPAIN-202ENST00000381208 GPR142Q7Z601 462 aa15.63■□□□□ 0.09
RPAIN-202ENST00000381208 ACER1Q8TDN7 264 aa15.63■□□□□ 0.09
RPAIN-202ENST00000381208 ARMT1Q9H993 441 aa15.63■□□□□ 0.09
RPAIN-202ENST00000381208 ECHDC1Q9NTX5 307 aa15.63■□□□□ 0.09
RPAIN-202ENST00000381208 HOXC10Q9NYD6 342 aa15.63■□□□□ 0.09
RPAIN-202ENST00000381208 MBD4O95243 580 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 ZKSCAN1P17029 563 aaPredicted RBP15.62■□□□□ 0.09
RPAIN-202ENST00000381208 CYP2B6P20813 491 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 SEPT2Q15019 361 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 LRRFIP1Q32MZ4 808 aaKnown RBP15.62■□□□□ 0.09
RPAIN-202ENST00000381208 Q3C1V9 767 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 C20orf194Q5TEA3 1177 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 NECAB2Q7Z6G3 386 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 LPAR1Q92633 364 aa15.62■□□□□ 0.09
RPAIN-202ENST00000381208 EDC3Q96F86 508 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms