RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PDHXO00330 501 aa23.04■■□□□ 1.28
GTF3A-201ENST00000381140 CRHR2Q13324 411 aa23.04■■□□□ 1.28
GTF3A-201ENST00000381140 ANKRD23Q86SG2 305 aa23.04■■□□□ 1.28
GTF3A-201ENST00000381140 ZNF444Q8N0Y2 327 aaPredicted RBP23.04■■□□□ 1.28
GTF3A-201ENST00000381140 ACER1Q8TDN7 264 aa23.04■■□□□ 1.28
GTF3A-201ENST00000381140 INCENPQ9NQS7 918 aa23.04■■□□□ 1.28
GTF3A-201ENST00000381140 TMOD4Q9NZQ9 345 aa23.04■■□□□ 1.28
GTF3A-201ENST00000381140 BACE1P56817 501 aa23.03■■□□□ 1.28
GTF3A-201ENST00000381140 ATP2B2Q01814 1243 aa23.03■■□□□ 1.28
GTF3A-201ENST00000381140 GPAT2Q6NUI2 795 aa23.03■■□□□ 1.28
GTF3A-201ENST00000381140 TOMM22Q9NS69 142 aa23.03■■□□□ 1.28
GTF3A-201ENST00000381140 ICA1Q05084 483 aa23.02■■□□□ 1.28
GTF3A-201ENST00000381140 TREML2Q5T2D2 321 aa23.02■■□□□ 1.28
GTF3A-201ENST00000381140 DSCC1Q9BVC3 393 aa23.02■■□□□ 1.28
GTF3A-201ENST00000381140 ZFYVE28Q9HCC9 887 aa23.02■■□□□ 1.28
GTF3A-201ENST00000381140 ZMYM6O95789 1325 aa23.02■■□□□ 1.28
GTF3A-201ENST00000381140 C19orf81C9J6K1 198 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 SGSM2O43147 1006 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 FAM47AQ5JRC9 791 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 RRP12Q5JTH9 1297 aaKnown RBP23.01■■□□□ 1.27
GTF3A-201ENST00000381140 USP17L2Q6R6M4 530 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 PROCA1Q8NCQ7 364 aaPredicted RBP23.01■■□□□ 1.27
GTF3A-201ENST00000381140 ARHGEF10LQ9HCE6 1279 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 ZCCHC17Q9NP64 241 aaKnown RBP23.01■■□□□ 1.27
GTF3A-201ENST00000381140 ANAPC4Q9UJX5 808 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 AGTPBP1Q9UPW5 1226 aa23.01■■□□□ 1.27
GTF3A-201ENST00000381140 GPR25O00155 361 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 ZNF213O14771 459 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 TSPY3P0CV98 308 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 TSPY8P0CW00 308 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 CYP2C8P10632 490 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 PTH1RQ03431 593 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 SH3D19Q5HYK7 790 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23■■□□□ 1.27
GTF3A-201ENST00000381140 TACC3Q9Y6A5 838 aa23■■□□□ 1.27
GTF3A-201ENST00000381140 A0A1W2PRG0 241 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 RANBP6O60518 1105 aaKnown RBP22.99■■□□□ 1.27
GTF3A-201ENST00000381140 CDC45O75419 566 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 TFAP4Q01664 338 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 TBC1D10CQ8IV04 446 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 ESYT1Q9BSJ8 1104 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 CFHR5Q9BXR6 569 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 KIAA1683Q9H0B3 1180 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 KANSL2Q9H9L4 492 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 PRDM10Q9NQV6 1147 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 EMILIN3Q9NT22 766 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 CTNNA3Q9UI47 895 aa22.99■■□□□ 1.27
GTF3A-201ENST00000381140 TSPY2A6NKD2 308 aa22.98■■□□□ 1.27
GTF3A-201ENST00000381140 RAD21O60216 631 aa22.98■■□□□ 1.27
GTF3A-201ENST00000381140 EEF2P13639 858 aaKnown RBP22.98■■□□□ 1.27
GTF3A-201ENST00000381140 USP14P54578 494 aa22.98■■□□□ 1.27
GTF3A-201ENST00000381140 CASC1Q6TDU7 716 aa22.98■■□□□ 1.27
GTF3A-201ENST00000381140 KIAA1211Q6ZU35 1233 aa22.98■■□□□ 1.27
GTF3A-201ENST00000381140 ZNF296Q8WUU4 475 aaPredicted RBP22.98■■□□□ 1.27
GTF3A-201ENST00000381140 PARK7Q99497 189 aaKnown RBP22.98■■□□□ 1.27
GTF3A-201ENST00000381140 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.98■■□□□ 1.27
GTF3A-201ENST00000381140 NBPF3Q9H094 633 aa22.98■■□□□ 1.27
GTF3A-201ENST00000381140 IMMTQ16891 758 aaKnown RBP22.97■■□□□ 1.27
GTF3A-201ENST00000381140 MFSD6Q6ZSS7 791 aa22.97■■□□□ 1.27
GTF3A-201ENST00000381140 SIAH1Q8IUQ4 282 aa22.97■■□□□ 1.27
GTF3A-201ENST00000381140 CPA4Q9UI42 421 aa22.97■■□□□ 1.27
GTF3A-201ENST00000381140 FKTNO75072 461 aa22.96■■□□□ 1.27
GTF3A-201ENST00000381140 PABPC4Q13310 644 aaKnown RBP eCLIP22.96■■□□□ 1.273e-8■■■■□ 24.1
GTF3A-201ENST00000381140 AKNAD1Q5T1N1 836 aa22.96■■□□□ 1.27
GTF3A-201ENST00000381140 SMCR8Q8TEV9 937 aaPredicted RBP22.96■■□□□ 1.27
GTF3A-201ENST00000381140 SH2D4AQ9H788 454 aa22.96■■□□□ 1.27
GTF3A-201ENST00000381140 PNMA3Q9UL41 463 aa22.96■■□□□ 1.27
GTF3A-201ENST00000381140 SLC45A1Q9Y2W3 748 aa22.96■■□□□ 1.27
GTF3A-201ENST00000381140 ORC4O43929 436 aa22.95■■□□□ 1.26
GTF3A-201ENST00000381140 TLR2O60603 784 aa22.95■■□□□ 1.26
GTF3A-201ENST00000381140 ECM2O94769 699 aaPredicted RBP22.95■■□□□ 1.26
GTF3A-201ENST00000381140 OSBPP22059 807 aa22.95■■□□□ 1.26
GTF3A-201ENST00000381140 IRX3P78415 501 aaPredicted RBP22.95■■□□□ 1.26
GTF3A-201ENST00000381140 NEDD1Q8NHV4 660 aa22.95■■□□□ 1.26
GTF3A-201ENST00000381140 CEP95Q96GE4 821 aa22.95■■□□□ 1.26
GTF3A-201ENST00000381140 U3KPZ7 1027 aaPredicted RBP22.95■■□□□ 1.26
GTF3A-201ENST00000381140 ZSWIM8A7E2V4 1837 aa22.95■■□□□ 1.26
GTF3A-201ENST00000381140 COL13A1Q5TAT6 717 aaPredicted RBP22.94■■□□□ 1.26
GTF3A-201ENST00000381140 SPICE1Q8N0Z3 855 aa22.94■■□□□ 1.26
GTF3A-201ENST00000381140 STAG1Q8WVM7 1258 aa22.94■■□□□ 1.26
GTF3A-201ENST00000381140 ASCC2Q9H1I8 757 aaPredicted RBP22.94■■□□□ 1.26
GTF3A-201ENST00000381140 RNF41Q9H4P4 317 aaPredicted RBP22.94■■□□□ 1.26
GTF3A-201ENST00000381140 ANO2Q9NQ90 1003 aa22.94■■□□□ 1.26
GTF3A-201ENST00000381140 CLIP2Q9UDT6 1046 aa22.94■■□□□ 1.26
GTF3A-201ENST00000381140 TMX2Q9Y320 296 aa22.94■■□□□ 1.26
GTF3A-201ENST00000381140 PLIN4Q96Q06 1357 aa22.93■■□□□ 1.26
GTF3A-201ENST00000381140 NEDD4P46934 1319 aa22.93■■□□□ 1.26
GTF3A-201ENST00000381140 NMT2O60551 498 aa22.93■■□□□ 1.26
GTF3A-201ENST00000381140 VCAM1P19320 739 aa22.93■■□□□ 1.26
GTF3A-201ENST00000381140 C12orf42Q96LP6 360 aa22.93■■□□□ 1.26
GTF3A-201ENST00000381140 IGKV6D-41A0A0C4DH26 115 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 FGRP09769 529 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 SP3Q02447 781 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 KIAA1755Q5JYT7 1200 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 RPAP3Q9H6T3 665 aaPredicted RBP22.92■■□□□ 1.26
GTF3A-201ENST00000381140 MTMR4Q9NYA4 1195 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 NYAP2Q9P242 653 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 RBM8AQ9Y5S9 174 aaKnown RBP22.92■■□□□ 1.26
GTF3A-201ENST00000381140 MGAMO43451 1857 aa22.92■■□□□ 1.26
GTF3A-201ENST00000381140 ADGRA2Q96PE1 1338 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms