RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CRB1P82279 1406 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 GOLGA6CA6NDK9 693 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 KCNJ18B7U540 433 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 GOLGA6DP0CG33 693 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 KCNJ12Q14500 433 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 CCDC84Q86UT8 332 aaPredicted RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 IPO4Q8TEX9 1081 aaKnown RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 PSMB7Q99436 277 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■■■■■ 151.4
DNMT3A-204ENST00000380756 GOLGA6AQ9NYA3 693 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 BAG6P46379 1132 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 BCAMP50895 628 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 TFAP4Q01664 338 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 USP21Q9UK80 565 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 IQGAP1P46940 1657 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 MRPL12P52815 198 aaKnown RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 MORC3Q14149 939 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 SLFNL1Q499Z3 407 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 HS2ST1Q7LGA3 356 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 ZSCAN10Q96SZ4 725 aaPredicted RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 FOXP1Q9H334 677 aaPredicted RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 SAP30BPQ9UHR5 308 aaKnown RBP14.23□□□□□ -0.13
DNMT3A-204ENST00000380756 GOLGA6BA6NDN3 693 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 GTF2A1P52655 376 aaPredicted RBP14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 PTGDRQ13258 359 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 KRT25Q7Z3Z0 450 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 GDAP1L1Q96MZ0 367 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 CCDC87Q9NVE4 849 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 LRWD1Q9UFC0 647 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 REREQ9P2R6 1566 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 CALRP27797 417 aaKnown RBP14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 ADD2P35612 726 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 PLA2G4DQ86XP0 818 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 GSDMAQ96QA5 445 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 TFCP2L1Q9NZI6 479 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 ERCC3P19447 782 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 POLD1P28340 1107 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 PRPHP41219 470 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 GPIHBP1Q8IV16 184 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 SYMPKQ92797 1274 aaKnown RBP14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 RPGRIP1Q96KN7 1286 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 CSRNP2Q9H175 543 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 RPAP1Q9BWH6 1393 aaPredicted RBP14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 PHLPP2Q6ZVD8 1323 aa14.22□□□□□ -0.13
DNMT3A-204ENST00000380756 KRT13P13646 458 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 CCDC144BQ3MJ40 725 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 FBXO38Q6PIJ6 1188 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 CABP7Q86V35 215 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 NOX5Q96PH1 765 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 HAUS4Q9H6D7 363 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 CDC23Q9UJX2 597 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 NDUFAB1O14561 156 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 IFNAR1P17181 557 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 SND1Q7KZF4 910 aaKnown RBP eCLIP14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 FAM207AQ9NSI2 230 aaPredicted RBP14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 H7C1D1 291 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 ST5P78524 1137 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 SLC9C1Q4G0N8 1177 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 GPATCH11Q8N954 259 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 IL25Q9H293 177 aa14.21□□□□□ -0.13
DNMT3A-204ENST00000380756 H7C1W4 665 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 CASP14P31944 242 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 RNASE9P60153 205 aaKnown RBP14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 TRAF1Q13077 416 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 NR5A1Q13285 461 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 DYMQ7RTS9 669 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 VSTM4Q8IW00 320 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 IFIH1Q9BYX4 1025 aaKnown RBP14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 PTPRMP28827 1452 aa14.21□□□□□ -0.14
DNMT3A-204ENST00000380756 SH2B2O14492 632 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 DNM2P50570 870 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 ZRSR2Q15696 482 aaKnown RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 DCAF17Q5H9S7 520 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 ENOX1Q8TC92 643 aaKnown RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RASAL2Q9UJF2 1139 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RTCBQ9Y3I0 505 aaKnown RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 EPN1Q9Y6I3 576 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 FMNL1O95466 1100 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RPL13P26373 211 aaKnown RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 GYG1P46976 350 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 SRGAP1Q7Z6B7 1085 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 BLIDQ8IZY5 108 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 SNX29Q8TEQ0 813 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 CDCA7Q9BWT1 371 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RNF26Q9BY78 433 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 CEP152O94986 1710 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 TLDC2A0PJX2 215 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms