RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 NUDT12Q9BQG2 462 aa20.86■□□□□ 0.93
HMGN1-204ENST00000380749 PAGR1Q9BTK6 254 aa20.86■□□□□ 0.93
HMGN1-204ENST00000380749 TXNRD2Q9NNW7 524 aa20.86■□□□□ 0.93
HMGN1-204ENST00000380749 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
HMGN1-204ENST00000380749 NR2E3Q9Y5X4 410 aa20.86■□□□□ 0.93
HMGN1-204ENST00000380749 SHMT1P34896 483 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 PLCD1P51178 756 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 CRISPLD2Q9H0B8 497 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
HMGN1-204ENST00000380749 PAG1Q9NWQ8 432 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 A0A0G2JMZ2 1700 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L15C9J2P7 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L13C9JLJ4 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L11C9JVI0 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L18D6R9N7 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L22D6RA61 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L17D6RBQ6 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L19D6RCP7 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L20D6RJB6 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 USP17L24Q0WX57 530 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.85■□□□□ 0.93
HMGN1-204ENST00000380749 KIAA1683Q9H0B3 1180 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 HMX1Q9NP08 348 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-204ENST00000380749 RBPJLQ9UBG7 517 aa20.85■□□□□ 0.93
HMGN1-204ENST00000380749 RLFQ13129 1914 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 RPTORQ8N122 1335 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 TCRBV5S4A2TA0A5A2 114 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 VCAM1P19320 739 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 CYP2B6P20813 491 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 CHRDL2Q6WN34 429 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 TRMT44Q8IYL2 757 aaKnown RBP20.84■□□□□ 0.93
HMGN1-204ENST00000380749 LCORLQ8N3X6 602 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 TRIB2Q92519 343 aa20.84■□□□□ 0.93
HMGN1-204ENST00000380749 COL11A1P12107 1806 aaPredicted RBP20.83■□□□□ 0.92
HMGN1-204ENST00000380749 PEX10O60683 326 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 XRCC5P13010 732 aaKnown RBP20.83■□□□□ 0.92
HMGN1-204ENST00000380749 FXR1P51114 621 aaKnown RBP eCLIP20.83■□□□□ 0.92
HMGN1-204ENST00000380749 CCNA1P78396 465 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 GABPAQ06546 454 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 ANKLE1Q8NAG6 615 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 EDC3Q96F86 508 aaKnown RBP20.83■□□□□ 0.92
HMGN1-204ENST00000380749 PORCNQ9H237 461 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 BOLA2Q9H3K6 86 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 DCP1AQ9NPI6 582 aaPredicted RBP20.83■□□□□ 0.92
HMGN1-204ENST00000380749 RABGAP1Q9Y3P9 1069 aa20.83■□□□□ 0.92
HMGN1-204ENST00000380749 ZNF236Q9UL36 1845 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 ZNFX1Q9P2E3 1918 aaKnown RBP20.82■□□□□ 0.92
HMGN1-204ENST00000380749 MPHOSPH10O00566 681 aaKnown RBP20.82■□□□□ 0.92
HMGN1-204ENST00000380749 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-204ENST00000380749 ATP5JP18859 108 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 RGS2P41220 211 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 GPR142Q7Z601 462 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 ACER1Q8TDN7 264 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 LRRCC1Q9C099 1032 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 ARMT1Q9H993 441 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 SWAP70Q9UH65 585 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 DNAH12Q6ZR08 3092 aa20.82■□□□□ 0.92
HMGN1-204ENST00000380749 EVI5O60447 810 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
HMGN1-204ENST00000380749 MBD4O95243 580 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 PRKAR2AP13861 404 aaKnown RBP20.81■□□□□ 0.92
HMGN1-204ENST00000380749 ADD2P35612 726 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 TRIM32Q13049 653 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 CATSPERGQ6ZRH7 1159 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 NECAB2Q7Z6G3 386 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 PLEKHH3Q7Z736 793 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 APBA2Q99767 749 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 HAUS7Q99871 368 aa20.81■□□□□ 0.92
HMGN1-204ENST00000380749 SEPT2Q15019 361 aa20.8■□□□□ 0.92
HMGN1-204ENST00000380749 Q3C1V9 767 aa20.8■□□□□ 0.92
HMGN1-204ENST00000380749 PAWRQ96IZ0 340 aaKnown RBP20.8■□□□□ 0.92
HMGN1-204ENST00000380749 ATP8A2Q9NTI2 1148 aa20.8■□□□□ 0.92
HMGN1-204ENST00000380749 MYH4Q9Y623 1939 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 GUCY1A2P33402 732 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 MAP3K21Q5TCX8 1036 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 WDR78Q5VTH9 848 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 LBX2Q6XYB7 198 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 TMEM179Q6ZVK1 233 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
HMGN1-204ENST00000380749 RPAP3Q9H6T3 665 aaPredicted RBP20.79■□□□□ 0.92
HMGN1-204ENST00000380749 MORN1Q5T089 497 aa20.78■□□□□ 0.92
HMGN1-204ENST00000380749 ZSCAN25Q6NSZ9 544 aa20.78■□□□□ 0.92
HMGN1-204ENST00000380749 DIS3LQ8TF46 1054 aaKnown RBP20.78■□□□□ 0.92
HMGN1-204ENST00000380749 USP6NLQ92738 828 aa20.78■□□□□ 0.92
HMGN1-204ENST00000380749 GREB1LQ9C091 1923 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-204ENST00000380749 SPDYE16A6NNV3 312 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-204ENST00000380749 CNMDO75829 334 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 CYP2D6P10635 497 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 EVX2Q03828 476 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 MAP2K5Q13163 448 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 UBE3CQ15386 1083 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 POTEEQ6S8J3 1075 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 SLC44A5Q8NCS7 719 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 IVNS1ABPQ9Y6Y0 642 aa20.77■□□□□ 0.92
HMGN1-204ENST00000380749 PLXNA1Q9UIW2 1896 aa20.76■□□□□ 0.91
HMGN1-204ENST00000380749 TANGO6Q9C0B7 1094 aa20.76■□□□□ 0.91
HMGN1-204ENST00000380749 NBPF3Q9H094 633 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms