RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 GRB14Q14449 540 aa21.35■■□□□ 1.01
HMGN1-203ENST00000380748 TRIM60Q495X7 471 aa21.35■■□□□ 1.01
HMGN1-203ENST00000380748 GORABQ5T7V8 394 aa21.35■■□□□ 1.01
HMGN1-203ENST00000380748 SYMPKQ92797 1274 aaKnown RBP21.35■■□□□ 1.01
HMGN1-203ENST00000380748 SAP30BPQ9UHR5 308 aaKnown RBP21.35■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L15C9J2P7 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L13C9JLJ4 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L11C9JVI0 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L18D6R9N7 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L22D6RA61 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L17D6RBQ6 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L19D6RCP7 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L20D6RJB6 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 GH2P01242 217 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 CYBAP13498 195 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L24Q0WX57 530 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 ALDH1L2Q3SY69 923 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 ANO1Q5XXA6 986 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
HMGN1-203ENST00000380748 SH3RF1Q7Z6J0 888 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 ADGRA1Q86SQ6 560 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 C12orf42Q96LP6 360 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 PDLIM7Q9NR12 457 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 BTBD7Q9P203 1132 aa21.34■■□□□ 1.01
HMGN1-203ENST00000380748 TRIM43BA6NCK2 446 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 SRGAP3O43295 1099 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 BAG3O95817 575 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 IGHA2P01877 340 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 COL9A1P20849 921 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 TRIM43Q96BQ3 446 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-203ENST00000380748 FEZ1Q99689 392 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 HDAC5Q9UQL6 1122 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 IVNS1ABPQ9Y6Y0 642 aa21.33■■□□□ 1.01
HMGN1-203ENST00000380748 KBTBD13C9JR72 458 aa21.32■■□□□ 1
HMGN1-203ENST00000380748 PLCG2P16885 1265 aa21.32■■□□□ 1
HMGN1-203ENST00000380748 SNX17Q15036 470 aa21.32■■□□□ 1
HMGN1-203ENST00000380748 CATSPERGQ6ZRH7 1159 aa21.32■■□□□ 1
HMGN1-203ENST00000380748 ARRDC4Q8NCT1 418 aa21.32■■□□□ 1
HMGN1-203ENST00000380748 E9PSI1 815 aa21.31■■□□□ 1
HMGN1-203ENST00000380748 MYCNP04198 464 aaPredicted RBP21.31■■□□□ 1
HMGN1-203ENST00000380748 VCAM1P19320 739 aa21.31■■□□□ 1
HMGN1-203ENST00000380748 PPP4CP60510 307 aa21.31■■□□□ 1
HMGN1-203ENST00000380748 USP38Q8NB14 1042 aa21.31■■□□□ 1
HMGN1-203ENST00000380748 SNRKQ9NRH2 765 aa21.31■■□□□ 1
HMGN1-203ENST00000380748 HLA-DOAP06340 250 aa21.3■■□□□ 1
HMGN1-203ENST00000380748 RAPGEFL1Q9UHV5 662 aa21.3■■□□□ 1
HMGN1-203ENST00000380748 NOB1Q9ULX3 412 aaKnown RBP21.3■■□□□ 1
HMGN1-203ENST00000380748 SPDYE16A6NNV3 312 aaPredicted RBP21.29■■□□□ 1
HMGN1-203ENST00000380748 ANP32CO43423 234 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 ITGB8P26012 769 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 ADCYAP1R1P41586 468 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 TJAP1Q5JTD0 557 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 LBX2Q6XYB7 198 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 ACER1Q8TDN7 264 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 FERMT2Q96AC1 680 aa21.29■■□□□ 1
HMGN1-203ENST00000380748 RNPC3Q96LT9 517 aaKnown RBP21.29■■□□□ 1
HMGN1-203ENST00000380748 ZNF236Q9UL36 1845 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 TNFRSF10AO00220 468 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 UQCRFS1P1P0C7P4 283 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 EPHB4P54760 987 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 MTX1Q13505 466 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 DPP9Q86TI2 863 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 KIAA1683Q9H0B3 1180 aa21.28■■□□□ 1
HMGN1-203ENST00000380748 MYO5AQ9Y4I1 1855 aaKnown RBP21.28■■□□□ 1
HMGN1-203ENST00000380748 TMEM265A0A087WTH1 108 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 SEPT4O43236 478 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 ADORA2AP29274 412 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 USP14P54578 494 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 DYNLL1P63167 89 aaKnown RBP21.27■■□□□ 1
HMGN1-203ENST00000380748 SLFN5Q08AF3 891 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 GRIN2CQ14957 1233 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 RAB3GAP1Q15042 981 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 OLFML2BQ68BL8 750 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 TATDN1Q6P1N9 297 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 ATF7IPQ6VMQ6 1270 aa21.27■■□□□ 1
HMGN1-203ENST00000380748 RPAP3Q9H6T3 665 aaPredicted RBP21.27■■□□□ 1
HMGN1-203ENST00000380748 MYH1P12882 1939 aa21.26■□□□□ 0.99
HMGN1-203ENST00000380748 TLE2Q04725 743 aa21.26■□□□□ 0.99
HMGN1-203ENST00000380748 LRRC41Q15345 812 aa21.26■□□□□ 0.99
HMGN1-203ENST00000380748 PRAMEF19Q5SWL8 479 aa21.26■□□□□ 0.99
HMGN1-203ENST00000380748 API5Q9BZZ5 524 aaKnown RBP21.26■□□□□ 0.99
HMGN1-203ENST00000380748 CYP2E1P05181 493 aaPredicted RBP21.25■□□□□ 0.99
HMGN1-203ENST00000380748 FAM47AQ5JRC9 791 aa21.25■□□□□ 0.99
HMGN1-203ENST00000380748 C1orf53Q5VUE5 145 aa21.25■□□□□ 0.99
HMGN1-203ENST00000380748 MOV10L1Q9BXT6 1211 aaKnown RBP21.25■□□□□ 0.99
HMGN1-203ENST00000380748 COBLO75128 1261 aa21.24■□□□□ 0.99
HMGN1-203ENST00000380748 GNAI3P08754 354 aa21.23■□□□□ 0.99
HMGN1-203ENST00000380748 DNAJB2P25686 324 aa21.23■□□□□ 0.99
HMGN1-203ENST00000380748 ABCB5Q2M3G0 1257 aa21.23■□□□□ 0.99
HMGN1-203ENST00000380748 TTC39AQ5SRH9 613 aa21.23■□□□□ 0.99
HMGN1-203ENST00000380748 CDCA7LQ96GN5 454 aa21.23■□□□□ 0.99
HMGN1-203ENST00000380748 SERPINB13Q9UIV8 391 aa21.23■□□□□ 0.99
HMGN1-203ENST00000380748 CLTBP09497 229 aa21.22■□□□□ 0.99
HMGN1-203ENST00000380748 CERKLQ49MI3 558 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-203ENST00000380748 PIH1D3Q9NQM4 214 aaKnown RBP21.22■□□□□ 0.99
HMGN1-203ENST00000380748 TACC3Q9Y6A5 838 aa21.22■□□□□ 0.99
HMGN1-203ENST00000380748 A0A0G2JMZ2 1700 aa21.21■□□□□ 0.99
HMGN1-203ENST00000380748 BDP1A6H8Y1 2624 aa21.21■□□□□ 0.99
HMGN1-203ENST00000380748 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
HMGN1-203ENST00000380748 STRNO43815 780 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms