RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 NT5DC1Q5TFE4 455 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 AMIGO3Q86WK7 504 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 NBPF5PQ86XG9 351 aaPredicted RBP22.94■■□□□ 1.26
EBF1-202ENST00000380654 NLRP3Q96P20 1036 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.94■■□□□ 1.26
EBF1-202ENST00000380654 PIP4K2BP78356 416 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 VSTM4Q8IW00 320 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 MED15Q96RN5 788 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 SETDB2Q96T68 719 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 CNTNAP4Q9C0A0 1308 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 CBFA2T2O43439 604 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 MORC3Q14149 939 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 NPY5RQ15761 445 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 DHX58Q96C10 678 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 ZNF215Q9UL58 517 aaPredicted RBP22.93■■□□□ 1.26
EBF1-202ENST00000380654 VEGFAP15692 232 aaPredicted RBP22.93■■□□□ 1.26
EBF1-202ENST00000380654 CASP1P29466 404 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 TMTC3Q6ZXV5 915 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 SRBD1Q8N5C6 995 aaKnown RBP22.93■■□□□ 1.26
EBF1-202ENST00000380654 RBM28Q9NW13 759 aaKnown RBP22.93■■□□□ 1.26
EBF1-202ENST00000380654 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.93■■□□□ 1.26
EBF1-202ENST00000380654 NFE2L3Q9Y4A8 694 aa22.93■■□□□ 1.26
EBF1-202ENST00000380654 V9GYY5 206 aaPredicted RBP22.93■■□□□ 1.26
EBF1-202ENST00000380654 CNTNAP5Q8WYK1 1306 aa22.92■■□□□ 1.26
EBF1-202ENST00000380654 KIF18AQ8NI77 898 aa22.92■■□□□ 1.26
EBF1-202ENST00000380654 NARFQ9UHQ1 456 aa22.92■■□□□ 1.26
EBF1-202ENST00000380654 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
EBF1-202ENST00000380654 GNPATO15228 680 aa22.92■■□□□ 1.26
EBF1-202ENST00000380654 ZNF174Q15697 407 aa22.92■■□□□ 1.26
EBF1-202ENST00000380654 SEMA3EO15041 775 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 ADAMTS3O15072 1205 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 TOP1P11387 765 aaKnown RBP22.91■■□□□ 1.26
EBF1-202ENST00000380654 AFMP43652 599 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 FAM182BQ5T319 152 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 CRNKL1Q9BZJ0 848 aaKnown RBP22.91■■□□□ 1.26
EBF1-202ENST00000380654 PSDA5PKW4 1024 aaPredicted RBP22.91■■□□□ 1.26
EBF1-202ENST00000380654 SYCP1Q15431 976 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 SYT10Q6XYQ8 523 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 SYMPKQ92797 1274 aaKnown RBP22.91■■□□□ 1.26
EBF1-202ENST00000380654 TNFRSF25Q93038 417 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 NYXQ9GZU5 481 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 LAMB1P07942 1786 aa22.91■■□□□ 1.26
EBF1-202ENST00000380654 DDAH1O94760 285 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 MLKLQ8NB16 471 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 SAMSN1Q9NSI8 373 aaKnown RBP22.9■■□□□ 1.26
EBF1-202ENST00000380654 SPDYE4A6NLX3 237 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 CALM1P0DP23 149 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 CALM2P0DP24 149 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 CALM3P0DP25 149 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 PCP11498 1178 aaKnown RBP22.9■■□□□ 1.26
EBF1-202ENST00000380654 ZNF18P17022 549 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 CBX1P83916 185 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 SPATA20Q8TB22 786 aa22.9■■□□□ 1.26
EBF1-202ENST00000380654 ORC4O43929 436 aa22.89■■□□□ 1.25
EBF1-202ENST00000380654 ZPR1O75312 459 aa22.89■■□□□ 1.25
EBF1-202ENST00000380654 KCNJ6P48051 423 aa22.89■■□□□ 1.25
EBF1-202ENST00000380654 TMX1Q9H3N1 280 aa22.89■■□□□ 1.25
EBF1-202ENST00000380654 KIAA1551Q9HCM1 1747 aa22.89■■□□□ 1.25
EBF1-202ENST00000380654 CCDC88AQ3V6T2 1871 aa22.89■■□□□ 1.25
EBF1-202ENST00000380654 NRDCO43847 1150 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 USP17L8P0C7I0 530 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 CDK11BP21127 795 aaKnown RBP22.88■■□□□ 1.25
EBF1-202ENST00000380654 TM4SF1P30408 202 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 CTCFLQ8NI51 663 aaPredicted RBP22.88■■□□□ 1.25
EBF1-202ENST00000380654 C8orf37Q96NL8 207 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 KANK3Q6NY19 840 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 ENOX1Q8TC92 643 aaKnown RBP22.88■■□□□ 1.25
EBF1-202ENST00000380654 ANKRD2Q9GZV1 360 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 ATP8A2Q9NTI2 1148 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 LTBP4Q8N2S1 1624 aa22.88■■□□□ 1.25
EBF1-202ENST00000380654 MYO1BO43795 1136 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 TTC38Q5R3I4 469 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 MCM9Q9NXL9 1143 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 COL24A1Q17RW2 1714 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 VWA3AA6NCI4 1184 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 TSPY2A6NKD2 308 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 PTGDRQ13258 359 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 DHX8Q14562 1220 aaKnown RBP22.87■■□□□ 1.25
EBF1-202ENST00000380654 RCSD1Q6JBY9 416 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 TPTE2Q6XPS3 522 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 TRIML1Q8N9V2 468 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 STAMQ92783 540 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 PAGE5Q96GU1 130 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 BRMS1Q9HCU9 246 aa22.87■■□□□ 1.25
EBF1-202ENST00000380654 KIF2AO00139 706 aaPredicted RBP22.86■■□□□ 1.25
EBF1-202ENST00000380654 TMEM139Q8IV31 216 aa22.86■■□□□ 1.25
EBF1-202ENST00000380654 DACH1Q9UI36 760 aa22.86■■□□□ 1.25
EBF1-202ENST00000380654 PDS5AQ29RF7 1337 aaKnown RBP22.86■■□□□ 1.25
EBF1-202ENST00000380654 SLFN14P0C7P3 912 aa22.86■■□□□ 1.25
EBF1-202ENST00000380654 CD44P16070 742 aaKnown RBP22.86■■□□□ 1.25
EBF1-202ENST00000380654 KLHL10Q6JEL2 608 aa22.86■■□□□ 1.25
EBF1-202ENST00000380654 PIK3AP1Q6ZUJ8 805 aa22.86■■□□□ 1.25
EBF1-202ENST00000380654 SMYD4Q8IYR2 804 aaPredicted RBP22.86■■□□□ 1.25
EBF1-202ENST00000380654 ARPP21Q9UBL0 812 aaPredicted RBP22.86■■□□□ 1.25
EBF1-202ENST00000380654 BTAF1O14981 1849 aa22.85■■□□□ 1.25
EBF1-202ENST00000380654 SCG2P13521 617 aa22.85■■□□□ 1.25
EBF1-202ENST00000380654 PLCD1P51178 756 aa22.85■■□□□ 1.25
EBF1-202ENST00000380654 DZIP1Q86YF9 867 aaKnown RBP22.85■■□□□ 1.25
EBF1-202ENST00000380654 HOMER1Q86YM7 354 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms