RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
HERC6-203ENST00000380265 PSMB7Q99436 277 aa13.71□□□□□ -0.21
HERC6-203ENST00000380265 JPH2Q9BR39 696 aaPredicted RBP13.71□□□□□ -0.21
HERC6-203ENST00000380265 CEP131Q9UPN4 1083 aa13.71□□□□□ -0.21
HERC6-203ENST00000380265 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
HERC6-203ENST00000380265 TNRQ92752 1358 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 GUCY1A2P33402 732 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 CKAP4Q07065 602 aaKnown RBP13.71□□□□□ -0.22
HERC6-203ENST00000380265 C2orf54Q08AI8 447 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 WASF1Q92558 559 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 JAKMIP2Q96AA8 810 aa13.71□□□□□ -0.22
HERC6-203ENST00000380265 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
HERC6-203ENST00000380265 CEBPAP49715 358 aaPredicted RBP13.7□□□□□ -0.22
HERC6-203ENST00000380265 WDR93Q6P2C0 686 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 CCDC51Q96ER9 411 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 XAGE2Q96GT9 111 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.7□□□□□ -0.22
HERC6-203ENST00000380265 FBXO2Q9UK22 296 aaPredicted RBP13.7□□□□□ -0.22
HERC6-203ENST00000380265 UBN2Q6ZU65 1347 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 KRT31Q15323 416 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
HERC6-203ENST00000380265 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
HERC6-203ENST00000380265 ZNF185O15231 689 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 IDEP14735 1019 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 SCARF1Q14162 830 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 CT47A1Q5JQC4 288 aaPredicted RBP13.7□□□□□ -0.22
HERC6-203ENST00000380265 KCTD16Q68DU8 428 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 GPIHBP1Q8IV16 184 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 VIPAS39Q9H9C1 493 aa13.7□□□□□ -0.22
HERC6-203ENST00000380265 NDUFA10O95299 355 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 SUGP1Q8IWZ8 645 aaKnown RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 MYO1AQ9UBC5 1043 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 ARHGAP25P42331 645 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 PPFIA1Q13136 1202 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 LUC7L2Q9Y383 392 aaKnown RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 PRPF6O94906 941 aaKnown RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 MYBL2P10244 700 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 TOB1P50616 345 aaPredicted RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 PDCLQ13371 301 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 ZNF526Q8TF50 670 aaPredicted RBP13.69□□□□□ -0.22
HERC6-203ENST00000380265 EEF2KMTQ96G04 330 aa13.69□□□□□ -0.22
HERC6-203ENST00000380265 ERICH2A1L162 156 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
HERC6-203ENST00000380265 A1BGP04217 495 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 DNA2P51530 1060 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
HERC6-203ENST00000380265 ZNHIT6Q9NWK9 470 aaKnown RBP13.68□□□□□ -0.22
HERC6-203ENST00000380265 FAM237AA0A1B0GTK4 181 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 TRIM75PA6NK02 468 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
HERC6-203ENST00000380265 KRT86O43790 486 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 SARSP49591 514 aaKnown RBP13.68□□□□□ -0.22
HERC6-203ENST00000380265 RTN1Q16799 776 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 EP400NLQ6ZTU2 488 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 CEP89Q96ST8 783 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 FMN2Q9NZ56 1722 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 SLC7A5Q01650 507 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 CTDSPL2Q05D32 466 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 IQCEQ6IPM2 695 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 HAUS4Q9H6D7 363 aa13.68□□□□□ -0.22
HERC6-203ENST00000380265 MYO1FO00160 1098 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 MMP1P03956 469 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 AARSP49588 968 aaKnown RBP eCLIP13.67□□□□□ -0.22
HERC6-203ENST00000380265 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 SYMPKQ92797 1274 aaKnown RBP13.67□□□□□ -0.22
HERC6-203ENST00000380265 PAGE5Q96GU1 130 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 TTF1Q15361 905 aaPredicted RBP13.67□□□□□ -0.22
HERC6-203ENST00000380265 ZNF174Q15697 407 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 NAPBQ9H115 298 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 FOXP2O15409 715 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 OPA1O60313 960 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 HSF2BPO75031 334 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 KCNA6P17658 529 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
HERC6-203ENST00000380265 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
HERC6-203ENST00000380265 ADAMTS13Q76LX8 1427 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 OR8K1Q8NGG5 319 aa13.67□□□□□ -0.22
HERC6-203ENST00000380265 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.66□□□□□ -0.22
HERC6-203ENST00000380265 FAM205CA6NFA0 338 aa13.66□□□□□ -0.22
HERC6-203ENST00000380265 TRIM21P19474 475 aaKnown RBP13.66□□□□□ -0.22
HERC6-203ENST00000380265 TDO2P48775 406 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms