RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 TRPM4Q8TD43 1214 aa14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 FAM217BQ9NTX9 383 aaPredicted RBP14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 HERC5Q9UII4 1024 aaKnown RBP14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 ASTN2O75129 1339 aaPredicted RBP14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 DHX16O60231 1041 aaKnown RBP14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 TBC1D12O60347 775 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 DDAH1O94760 285 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 SLURP2P0DP57 97 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 AKR1B1P15121 316 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 CDC27P30260 824 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 TNNI2P48788 182 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 MAP3K10Q02779 954 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 PKP1Q13835 747 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 PPP2R5BQ15173 497 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 NTRK3Q16288 839 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 CCDC17Q96LX7 622 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 TEPSINQ96N21 525 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 MYL10Q9BUA6 226 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 TMEM39BQ9GZU3 492 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 HACL1Q9UJ83 578 aa14.02□□□□□ -0.16
EXOSC9-202ENST00000379663 JAK2O60674 1132 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 RXRAP19793 462 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 EPS15P42566 896 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 NUCB2P80303 420 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 HMGN5P82970 282 aaKnown RBP14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 RAB11FIP4Q86YS3 637 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 CDAN1Q8IWY9 1227 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 CRACR2BQ8N4Y2 399 aaPredicted RBP14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 ZDHHC9Q9Y397 364 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 PARP14Q460N5 1801 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 PITPNM2Q9BZ72 1349 aa14.01□□□□□ -0.17
EXOSC9-202ENST00000379663 PTPRFP10586 1907 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 FAM196BA6NMK8 535 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 GOLGA8AA7E2F4 631 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 CALM1P0DP23 149 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 CALM2P0DP24 149 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 CALM3P0DP25 149 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 HIRAP54198 1017 aaPredicted RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 RASA3Q14644 834 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 RBM26Q5T8P6 1007 aaKnown RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 MAP3K14Q99558 947 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 ADARB2Q9NS39 739 aaKnown RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 BRD1O95696 1058 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 FDPSP14324 419 aaKnown RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 SYT1P21579 422 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 ADD1P35611 737 aaKnown RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 RTN1Q16799 776 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 CATIPQ7Z7H3 387 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 APOBEC3FQ8IUX4 373 aaKnown RBP14□□□□□ -0.17
EXOSC9-202ENST00000379663 FANCBQ8NB91 859 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 PNMA1Q8ND90 353 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 TMEM47Q9BQJ4 181 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 MTMR4Q9NYA4 1195 aa14□□□□□ -0.17
EXOSC9-202ENST00000379663 STK36Q9NRP7 1315 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 SSC5DA1L4H1 1573 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 CCDC196A0A1B0GTZ2 297 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 DTNBO60941 627 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 IFNAR1P17181 557 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 LMOD1P29536 600 aaPredicted RBP13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 RRP1BQ14684 758 aaKnown RBP13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 CERKLQ49MI3 558 aaPredicted RBP13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 STX8Q9UNK0 236 aa13.99□□□□□ -0.17
EXOSC9-202ENST00000379663 GLTPD2A6NH11 291 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 CPLX1O14810 134 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 STX6O43752 255 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 CDKL5O76039 1030 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 PDCP20941 246 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 GUCY1A2P33402 732 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 FUT2Q10981 343 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 ANGEL2Q5VTE6 544 aaKnown RBP13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 TMEM179Q6ZVK1 233 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 NBPF11Q86T75 865 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 DEFB129Q9H1M3 183 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 GGA3Q9NZ52 723 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 PPP2R3BQ9Y5P8 575 aa13.98□□□□□ -0.17
EXOSC9-202ENST00000379663 TTLL1O95922 423 aa13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 SHROOM1Q2M3G4 852 aaPredicted RBP13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 NUP133Q8WUM0 1156 aa13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 WDR33Q9C0J8 1336 aaKnown RBP13.97□□□□□ -0.17
EXOSC9-202ENST00000379663 HAX1O00165 279 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms