RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 ELP3Q9H9T3 547 aa28.79■■■□□ 2.2
TM6SF1-204ENST00000379390 EXOSC10Q01780 885 aaKnown RBP28.78■■■□□ 2.2
TM6SF1-204ENST00000379390 ZSCAN10Q96SZ4 725 aaPredicted RBP28.78■■■□□ 2.2
TM6SF1-204ENST00000379390 GPHNQ9NQX3 736 aaPredicted RBP28.78■■■□□ 2.2
TM6SF1-204ENST00000379390 HUNKP57058 714 aa28.77■■■□□ 2.2
TM6SF1-204ENST00000379390 ICA1Q05084 483 aa28.77■■■□□ 2.2
TM6SF1-204ENST00000379390 CNKSR2Q8WXI2 1034 aa28.77■■■□□ 2.2
TM6SF1-204ENST00000379390 MTMR4Q9NYA4 1195 aa28.77■■■□□ 2.2
TM6SF1-204ENST00000379390 IFIT3O14879 490 aaKnown RBP28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 PTPRAP18433 802 aa28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 ATP2B2Q01814 1243 aa28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 ENAHQ8N8S7 591 aaPredicted RBP28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 KANSL2Q9H9L4 492 aa28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 TCP11L1Q9NUJ3 509 aa28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 STX8Q9UNK0 236 aa28.76■■■□□ 2.2
TM6SF1-204ENST00000379390 TMEM88BA6NKF7 163 aa28.76■■■□□ 2.19
TM6SF1-204ENST00000379390 TMEM67Q5HYA8 995 aa28.76■■■□□ 2.19
TM6SF1-204ENST00000379390 GINM1Q9NU53 330 aa28.76■■■□□ 2.19
TM6SF1-204ENST00000379390 WDR19Q8NEZ3 1342 aa28.75■■■□□ 2.19
TM6SF1-204ENST00000379390 NEK4P51957 841 aa28.75■■■□□ 2.19
TM6SF1-204ENST00000379390 SART3Q15020 963 aaKnown RBP28.75■■■□□ 2.19
TM6SF1-204ENST00000379390 RCSD1Q6JBY9 416 aa28.75■■■□□ 2.19
TM6SF1-204ENST00000379390 SAPCD2Q86UD0 394 aa28.75■■■□□ 2.19
TM6SF1-204ENST00000379390 USP17L5A8MUK1 530 aa28.74■■■□□ 2.19
TM6SF1-204ENST00000379390 EEF2P13639 858 aaKnown RBP28.74■■■□□ 2.19
TM6SF1-204ENST00000379390 SEC23AQ15436 765 aa28.74■■■□□ 2.19
TM6SF1-204ENST00000379390 IGDCC4Q8TDY8 1250 aa28.74■■■□□ 2.19
TM6SF1-204ENST00000379390 SENP2Q9HC62 589 aa28.74■■■□□ 2.19
TM6SF1-204ENST00000379390 ABT1Q9ULW3 272 aaKnown RBP28.74■■■□□ 2.19
TM6SF1-204ENST00000379390 ERICH2A1L162 156 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 RABEP1Q15276 862 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 Q6ZUG5 572 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 SIAH1Q8IUQ4 282 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 OTUD5Q96G74 571 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 TMEM87BQ96K49 555 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 PDRG1Q9NUG6 133 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 ZHX2Q9Y6X8 837 aa28.73■■■□□ 2.19
TM6SF1-204ENST00000379390 SH2B2O14492 632 aaPredicted RBP28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 TTLL1O95922 423 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 FGD1P98174 961 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 ACER1Q8TDN7 264 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 SLC10A4Q96EP9 437 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 LY9Q9HBG7 655 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 CLIP2Q9UDT6 1046 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 TLL2Q9Y6L7 1015 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 ECE1P42892 770 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 WTAPQ15007 396 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 ERO1BQ86YB8 467 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 LRRC47Q8N1G4 583 aaKnown RBP28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 OPTNQ96CV9 577 aa28.72■■■□□ 2.19
TM6SF1-204ENST00000379390 A0A1W2PRG0 241 aa28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 SPDYE5A6NIY4 337 aa28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 UNCXA6NJT0 531 aa28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 APLP1P51693 650 aa28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 IFIT1BQ5T764 474 aaKnown RBP28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 TTC14Q96N46 770 aa28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 NYAP2Q9P242 653 aa28.71■■■□□ 2.19
TM6SF1-204ENST00000379390 NOVP48745 357 aa28.7■■■□□ 2.19
TM6SF1-204ENST00000379390 CCDC178Q5BJE1 867 aa28.7■■■□□ 2.19
TM6SF1-204ENST00000379390 DGKHQ86XP1 1220 aa28.7■■■□□ 2.19
TM6SF1-204ENST00000379390 MTA3Q9BTC8 594 aa28.7■■■□□ 2.19
TM6SF1-204ENST00000379390 ARHGEF10LQ9HCE6 1279 aa28.7■■■□□ 2.19
TM6SF1-204ENST00000379390 TRIM75PA6NK02 468 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 SPP2Q13103 211 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 ZYXQ15942 572 aaKnown RBP28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 BRF1Q92994 677 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 FEZ1Q99689 392 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 TMEM47Q9BQJ4 181 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 AS3MTQ9HBK9 375 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 GJA5P36382 358 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 TOB2Q14106 344 aaPredicted RBP28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 ZNF280CQ8ND82 737 aa28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 LARP6Q9BRS8 491 aaKnown RBP28.69■■■□□ 2.18
TM6SF1-204ENST00000379390 AK2P54819 239 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 PPATQ06203 517 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 MTMR2Q13614 643 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 PPP4R3BQ5MIZ7 849 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 NFXL1Q6ZNB6 911 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 NOL8Q76FK4 1167 aaKnown RBP28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 WDR18Q9BV38 432 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 AFG3L2Q9Y4W6 797 aa28.68■■■□□ 2.18
TM6SF1-204ENST00000379390 LOC285556D6RIA3 1793 aa28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 TOP1P11387 765 aaKnown RBP28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 ZNF157P51786 506 aaPredicted RBP28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 ANKS1AQ92625 1134 aa28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 AGXT2Q9BYV1 514 aa28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 KAT14Q9H8E8 782 aa28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 MTMR7Q9Y216 660 aa28.67■■■□□ 2.18
TM6SF1-204ENST00000379390 IRF6O14896 467 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 LIFRP42702 1097 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 APOBRQ0VD83 1088 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 MKRN3Q13064 507 aaKnown RBP28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 CHMP4CQ96CF2 233 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 WNK4Q96J92 1243 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 CREBZFQ9NS37 354 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 TMX2Q9Y320 296 aa28.66■■■□□ 2.18
TM6SF1-204ENST00000379390 RAD21O60216 631 aa28.65■■■□□ 2.18
TM6SF1-204ENST00000379390 PPIL2Q13356 520 aa28.65■■■□□ 2.18
TM6SF1-204ENST00000379390 DGKZQ13574 1117 aa28.65■■■□□ 2.18
TM6SF1-204ENST00000379390 RGMBQ6NW40 437 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms