RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 CEP131Q9UPN4 1083 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 UFL1O94874 794 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 PLCG2P16885 1265 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 USP5P45974 858 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 DIS3L2Q8IYB7 885 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 STK11IPQ8N1F8 1099 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 TBC1D22AQ8WUA7 517 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 MROH7-TTC4A0A0A0MT08 1334 aa12.07□□□□□ -0.48
POLR2J3-201ENST00000379340 CYP2D7A0A087X1C5 515 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 A0A1B0GVL5 298 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 GLTPD2A6NH11 291 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 GOLGA6L19H0YKK7 550 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 NDUFA8P51970 172 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 TROAPQ12815 778 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 ZRSR1Q15695 479 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 LUZP1Q86V48 1076 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 CEP57L1Q8IYX8 460 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 SDF4Q9BRK5 362 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 DNAJC25Q9H1X3 360 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 ZNF287Q9HBT7 754 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 CD209Q9NNX6 404 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 MCM9Q9NXL9 1143 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 DDX60LQ5H9U9 1706 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
POLR2J3-201ENST00000379340 FOXN1O15353 648 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 ZNF202O95125 648 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 PFKFB1P16118 471 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 CDC25BP30305 580 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 KIF5BP33176 963 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 GUCY1A2P33402 732 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 KIAA2012Q0VF49 1180 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 FUT2Q10981 343 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 SARM1Q6SZW1 724 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 TMTC3Q6ZXV5 915 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 BPIFA3Q9BQP9 254 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 TCP11L1Q9NUJ3 509 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 KIAA1468Q9P260 1216 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 HPSEQ9Y251 543 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 ANKRD31Q8N7Z5 1873 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 PRDM1O75626 825 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 BMP15O95972 392 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 IQCB1Q15051 598 aa12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
POLR2J3-201ENST00000379340 FAM205AQ6ZU69 1335 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 FOCADQ5VW36 1801 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 BECN2A8MW95 431 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 BTBD18B2RXH4 712 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 NFKBIEO00221 500 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 OFD1O75665 1012 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 WDHD1O75717 1129 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 POTEIP0CG38 1075 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 LMNB1P20700 586 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 KRT2P35908 639 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 SYKP43405 635 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 FAM177A1Q8N128 213 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 TBC1D16Q8TBP0 767 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 SH3RF3Q8TEJ3 882 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 PHF20Q9BVI0 1012 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 SUGT1Q9Y2Z0 365 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 CNTNAP5Q8WYK1 1306 aa12.04□□□□□ -0.48
POLR2J3-201ENST00000379340 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 AP5Z1O43299 807 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 CYP2D6P10635 497 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 GNAQP50148 359 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 ZNF75DP51815 510 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 NLRP12P59046 1061 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 PKN1Q16512 942 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 C11orf57Q6ZUT1 292 aaPredicted RBP12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 KAT14Q9H8E8 782 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 HOOK1Q9UJC3 728 aaKnown RBP12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
POLR2J3-201ENST00000379340 GAKO14976 1311 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms