RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SEMA3EO15041 775 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ATP2C2O75185 946 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 GNGT1P63211 74 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 CCDC84Q86UT8 332 aaPredicted RBP9.8□□□□□ -0.84
PCDH9-202ENST00000377865 SMARCC2Q8TAQ2 1214 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 UBLCP1Q8WVY7 318 aaPredicted RBP9.8□□□□□ -0.84
PCDH9-202ENST00000377865 MYCBPQ99417 103 aaPredicted RBP9.8□□□□□ -0.84
PCDH9-202ENST00000377865 CCDC77Q9BR77 488 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 GOLPH3LQ9H4A5 285 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 MAST3O60307 1309 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 MPHOSPH10O00566 681 aaKnown RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 PDE8AO60658 829 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 SLC9C1Q4G0N8 1177 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 CEP57Q86XR8 500 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 FAM204AQ9H8W3 233 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 PCDHA5Q9Y5H7 936 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 TCP1P17987 556 aaKnown RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 HNRNPH2P55795 449 aaKnown RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 CTDSPL2Q05D32 466 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 ASIC2Q16515 512 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 FMR1NBQ8N0W7 255 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 SCLT1Q96NL6 688 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 COPB1P53618 953 aaKnown RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 RESP18Q5W5W9 173 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 CC2D1AQ6P1N0 951 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 SLC35F6Q8N357 371 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 M0R2C6 588 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 FGAP02671 866 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 KCNA6P17658 529 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 CCDC65Q8IXS2 484 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 MIGA1Q8NAN2 632 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 CLIC6Q96NY7 704 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 V9GY48 417 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 SASH1O94885 1247 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 IL2RBP14784 551 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 RBL2Q08999 1139 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 UBE3CQ15386 1083 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 SPATA5Q8NB90 893 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 IFT74Q96LB3 600 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 LZTS2Q9BRK4 669 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 IFIH1Q9BYX4 1025 aaKnown RBP9.79□□□□□ -0.84
PCDH9-202ENST00000377865 ANKIB1Q9P2G1 1089 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 PRR36Q9H6K5 1346 aa9.79□□□□□ -0.84
PCDH9-202ENST00000377865 VGLL3A8MV65 326 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ZSCAN20P17040 1043 aaPredicted RBP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 UTP11Q9Y3A2 253 aaKnown RBP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 EPN1Q9Y6I3 576 aaPredicted RBP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ITSN1Q15811 1721 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 A0A087WUV0 522 aaPredicted RBP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 DESP17661 470 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 MAGEA1P43355 309 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ZNF654Q8IZM8 581 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 LONRF3Q496Y0 759 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 SYCE1Q8N0S2 351 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 FTOQ9C0B1 505 aaKnown RBP eCLIP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ARHGEF28Q8N1W1 1705 aaKnown RBP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 KRT13P13646 458 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 MAP2K2P36507 400 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 SSR1P43307 286 aaKnown RBP9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ARID5BQ14865 1188 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 CEP128Q6ZU80 1094 aa9.78□□□□□ -0.84
PCDH9-202ENST00000377865 ANKRD62A6NC57 917 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 RNF40O75150 1001 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 DDAH1O94760 285 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 CASP14P31944 242 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 LACTBP83111 547 aaPredicted RBP9.77□□□□□ -0.84
PCDH9-202ENST00000377865 C6orf163Q5TEZ5 329 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.84
PCDH9-202ENST00000377865 VAT1LQ9HCJ6 419 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 FAN1Q9Y2M0 1017 aa9.77□□□□□ -0.84
PCDH9-202ENST00000377865 ZPR1O75312 459 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 GNA14O95837 355 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 EEF1GP26641 437 aaKnown RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 HOXA7P31268 230 aaPredicted RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 CCZ1BP86790 482 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 CCZ1P86791 482 aaPredicted RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 USP27XA6NNY8 438 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 SH2B2O14492 632 aaPredicted RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 PCP11498 1178 aaKnown RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 RPL13P26373 211 aaKnown RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 SAMD1Q6SPF0 538 aaPredicted RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 CTNNBL1Q8WYA6 563 aaPredicted RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 ZNF496Q96IT1 587 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms