RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 RGS22Q8NE09 1264 aa20.65■□□□□ 0.9
SF1-203ENST00000377387 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
SF1-203ENST00000377387 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.65■□□□□ 0.9
SF1-203ENST00000377387 BMS1Q14692 1282 aaKnown RBP20.65■□□□□ 0.9
SF1-203ENST00000377387 SEC23AQ15436 765 aa20.65■□□□□ 0.9
SF1-203ENST00000377387 TERF2Q15554 542 aa20.65■□□□□ 0.9
SF1-203ENST00000377387 KIF20AO95235 890 aa20.64■□□□□ 0.9
SF1-203ENST00000377387 XBP1P17861 261 aa20.64■□□□□ 0.9
SF1-203ENST00000377387 KRT2P35908 639 aa20.64■□□□□ 0.9
SF1-203ENST00000377387 GABPB1Q06547 395 aaPredicted RBP20.64■□□□□ 0.9
SF1-203ENST00000377387 ITPK1Q13572 414 aa20.64■□□□□ 0.9
SF1-203ENST00000377387 ZSCAN10Q96SZ4 725 aaPredicted RBP20.64■□□□□ 0.9
SF1-203ENST00000377387 PLCD1P51178 756 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 FAM47AQ5JRC9 791 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 CATIPQ7Z7H3 387 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 FHOD1Q9Y613 1164 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 STX10O60499 249 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 NT5DC1Q5TFE4 455 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 TMCO3Q6UWJ1 677 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 PAGE5Q96GU1 130 aa20.64■□□□□ 0.89
SF1-203ENST00000377387 MRPL44Q9H9J2 332 aaKnown RBP20.64■□□□□ 0.89
SF1-203ENST00000377387 CHD4Q14839 1912 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 TADA3O75528 432 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 VEGFAP15692 232 aaPredicted RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 CCT6AP40227 531 aaKnown RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 RBL2Q08999 1139 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 CCDC12Q8WUD4 166 aaPredicted RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 POLR3GO15318 223 aaPredicted RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 PNMA6AP0CW24 399 aaPredicted RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 CDC25AP30304 524 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 NR1I3Q14994 352 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 KANK3Q6NY19 840 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 ZNF579Q8NAF0 562 aaKnown RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 RNF26Q9BY78 433 aaPredicted RBP20.63■□□□□ 0.89
SF1-203ENST00000377387 MTMR7Q9Y216 660 aa20.63■□□□□ 0.89
SF1-203ENST00000377387 USP17L12C9JPN9 530 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 USP17L21D6R901 530 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 TUBB4AP04350 444 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 MAPK8IP1Q9UQF2 711 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 LRP6O75581 1613 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 MYH2Q9UKX2 1941 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 PPFIBP1Q86W92 1011 aa20.62■□□□□ 0.89
SF1-203ENST00000377387 AKR1B15C9JRZ8 316 aaPredicted RBP20.61■□□□□ 0.89
SF1-203ENST00000377387 PTGDRQ13258 359 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 DDB1Q16531 1140 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 ARGLU1Q9NWB6 273 aaPredicted RBP20.61■□□□□ 0.89
SF1-203ENST00000377387 SYNRGQ9UMZ2 1314 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 ADAMTS3O15072 1205 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 MYO1BO43795 1136 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 PPP2R3AQ06190 1150 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 IQCA1Q86XH1 822 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 PHF20Q9BVI0 1012 aa20.61■□□□□ 0.89
SF1-203ENST00000377387 NTSR2O95665 410 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 MCM7P33993 719 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 PIK3AP1Q6ZUJ8 805 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 MARCH10Q8NA82 808 aaPredicted RBP20.6■□□□□ 0.89
SF1-203ENST00000377387 CTNND2Q9UQB3 1225 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 FCHSD1Q86WN1 690 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 TRIML1Q8N9V2 468 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 AATFQ9NY61 560 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■□□□ 14.4
SF1-203ENST00000377387 LOC102724428A0A0B4J2F2 783 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 GTF2E1P29083 439 aaPredicted RBP20.6■□□□□ 0.89
SF1-203ENST00000377387 SIK1P57059 783 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 RAD9BQ6WBX8 426 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 PTF1AQ7RTS3 328 aa20.6■□□□□ 0.89
SF1-203ENST00000377387 RIOK1Q9BRS2 568 aaKnown RBP20.6■□□□□ 0.89
SF1-203ENST00000377387 RTL9Q8NET4 1388 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 EFCAB8A8MWE9 144 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 KLRK1P26718 216 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 DPYDQ12882 1025 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 ERFEQ4G0M1 354 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 TTC38Q5R3I4 469 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 SPATA1Q5VX52 437 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 FAM53CQ9NYF3 392 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 A0A1B0GTH6 734 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 CASP14P31944 242 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 PLA2G4AP47712 749 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 FUT2Q10981 343 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
SF1-203ENST00000377387 VPS16Q9H269 839 aa20.59■□□□□ 0.89
SF1-203ENST00000377387 GNL3LQ9NVN8 582 aaKnown RBP20.59■□□□□ 0.89
SF1-203ENST00000377387 PUF60Q9UHX1 559 aaKnown RBP20.59■□□□□ 0.89
SF1-203ENST00000377387 CYP2D6P10635 497 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 ERCC5P28715 1186 aaPredicted RBP20.58■□□□□ 0.89
SF1-203ENST00000377387 NLRP5P59047 1200 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 ELOA2Q8IYF1 753 aaPredicted RBP20.58■□□□□ 0.89
SF1-203ENST00000377387 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
SF1-203ENST00000377387 SPATA20Q8TB22 786 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 ZNF384Q8TF68 577 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 AK7Q96M32 723 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 SRRTQ9BXP5 876 aaKnown RBP20.58■□□□□ 0.89
SF1-203ENST00000377387 TFCP2L1Q9NZI6 479 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 DISP2A7MBM2 1401 aa20.58■□□□□ 0.89
SF1-203ENST00000377387 BAZ2AQ9UIF9 1905 aaKnown RBP20.58■□□□□ 0.88
SF1-203ENST00000377387 MAP3K9P80192 1104 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms