RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 DYNLL2Q96FJ2 89 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 KIAA1683Q9H0B3 1180 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 OSBPL3Q9H4L5 887 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 MKNK2Q9HBH9 465 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 ARHGEF10LQ9HCE6 1279 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 LOC285556D6RIA3 1793 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 M0R2C6 588 aa26.41■■□□□ 1.82
SRM-201ENST00000376957 BCRP11274 1271 aa26.41■■□□□ 1.82
SRM-201ENST00000376957 ASCC2Q9H1I8 757 aaPredicted RBP26.41■■□□□ 1.82
SRM-201ENST00000376957 HELLSQ9NRZ9 838 aa26.41■■□□□ 1.82
SRM-201ENST00000376957 SEPT2Q15019 361 aa26.4■■□□□ 1.82
SRM-201ENST00000376957 NAPBQ9H115 298 aa26.4■■□□□ 1.82
SRM-201ENST00000376957 CYP2D7A0A087X1C5 515 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 ZYXQ15942 572 aaKnown RBP26.39■■□□□ 1.82
SRM-201ENST00000376957 FAM110CQ1W6H9 321 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 SHROOM1Q2M3G4 852 aaPredicted RBP26.39■■□□□ 1.82
SRM-201ENST00000376957 PLEKHM2Q8IWE5 1019 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 IFNL3Q8IZI9 196 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 ANKRD13CQ8N6S4 541 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 SLC44A5Q8NCS7 719 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 C12orf42Q96LP6 360 aa26.39■■□□□ 1.82
SRM-201ENST00000376957 MFAP1P55081 439 aaKnown RBP26.38■■□□□ 1.81
SRM-201ENST00000376957 KANSL2Q9H9L4 492 aa26.38■■□□□ 1.81
SRM-201ENST00000376957 EMILIN3Q9NT22 766 aa26.38■■□□□ 1.81
SRM-201ENST00000376957 USP17L15C9J2P7 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L13C9JLJ4 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L11C9JVI0 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L18D6R9N7 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L22D6RA61 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L17D6RBQ6 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L19D6RCP7 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L20D6RJB6 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 USP17L24Q0WX57 530 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 SLC9C1Q4G0N8 1177 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 MCMDC2Q4G0Z9 681 aa26.37■■□□□ 1.81
SRM-201ENST00000376957 ZNF444Q8N0Y2 327 aaPredicted RBP26.37■■□□□ 1.81
SRM-201ENST00000376957 SEC62Q99442 399 aaKnown RBP26.37■■□□□ 1.81
SRM-201ENST00000376957 HIP1O00291 1037 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 ICA1Q05084 483 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 PDE4BQ07343 736 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 RAET1EQ8TD07 263 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 COA7Q96BR5 231 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 ARHGAP39Q9C0H5 1083 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 SRRDQ9UH36 339 aa26.36■■□□□ 1.81
SRM-201ENST00000376957 TNPO2O14787 897 aaKnown RBP26.35■■□□□ 1.81
SRM-201ENST00000376957 ECM2O94769 699 aaPredicted RBP26.35■■□□□ 1.81
SRM-201ENST00000376957 AKR1B1P15121 316 aa26.35■■□□□ 1.81
SRM-201ENST00000376957 EVX2Q03828 476 aa26.35■■□□□ 1.81
SRM-201ENST00000376957 CCAR1Q8IX12 1150 aaKnown RBP26.35■■□□□ 1.81
SRM-201ENST00000376957 GUCY1A2P33402 732 aa26.34■■□□□ 1.81
SRM-201ENST00000376957 HERVK_113P62684 666 aa26.34■■□□□ 1.81
SRM-201ENST00000376957 ACER1Q8TDN7 264 aa26.34■■□□□ 1.81
SRM-201ENST00000376957 LPAR1Q92633 364 aa26.34■■□□□ 1.81
SRM-201ENST00000376957 TRIM47Q96LD4 638 aa26.34■■□□□ 1.81
SRM-201ENST00000376957 MYPNQ86TC9 1320 aa26.34■■□□□ 1.81
SRM-201ENST00000376957 ROBO3Q96MS0 1386 aa26.33■■□□□ 1.81
SRM-201ENST00000376957 VCAM1P19320 739 aa26.33■■□□□ 1.81
SRM-201ENST00000376957 GPRC5AQ8NFJ5 357 aa26.33■■□□□ 1.81
SRM-201ENST00000376957 P2RX7Q99572 595 aaKnown RBP26.33■■□□□ 1.81
SRM-201ENST00000376957 PTCH2Q9Y6C5 1203 aa26.33■■□□□ 1.81
SRM-201ENST00000376957 ATP2B2Q01814 1243 aa26.32■■□□□ 1.8
SRM-201ENST00000376957 STK11IPQ8N1F8 1099 aa26.32■■□□□ 1.8
SRM-201ENST00000376957 EPB41L4AQ9HCS5 686 aaPredicted RBP26.32■■□□□ 1.8
SRM-201ENST00000376957 DIAPH3Q9NSV4 1193 aa26.32■■□□□ 1.8
SRM-201ENST00000376957 CATSPERGQ6ZRH7 1159 aa26.31■■□□□ 1.8
SRM-201ENST00000376957 GOPCQ9HD26 462 aa26.31■■□□□ 1.8
SRM-201ENST00000376957 MORF4L1Q9UBU8 362 aa26.31■■□□□ 1.8
SRM-201ENST00000376957 TMX2Q9Y320 296 aa26.31■■□□□ 1.8
SRM-201ENST00000376957 SDSP20132 328 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 CCNA1P78396 465 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 PPARAQ07869 468 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 PPP4R3BQ5MIZ7 849 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 CCDC129Q6ZRS4 1044 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 ARMC5Q96C12 935 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 TMEM106CQ9BVX2 250 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 RPAP3Q9H6T3 665 aaPredicted RBP26.3■■□□□ 1.8
SRM-201ENST00000376957 CWC22Q9HCG8 908 aaKnown RBP26.3■■□□□ 1.8
SRM-201ENST00000376957 HOXC10Q9NYD6 342 aa26.3■■□□□ 1.8
SRM-201ENST00000376957 FAM227BQ96M60 508 aa26.29■■□□□ 1.8
SRM-201ENST00000376957 TANGO6Q9C0B7 1094 aa26.29■■□□□ 1.8
SRM-201ENST00000376957 MGAMO43451 1857 aa26.29■■□□□ 1.8
SRM-201ENST00000376957 A0A1W2PRG0 241 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 TSPY3P0CV98 308 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 TSPY8P0CW00 308 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 EEF2P13639 858 aaKnown RBP26.28■■□□□ 1.8
SRM-201ENST00000376957 RASA1P20936 1047 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 RGS19P49795 217 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 SOX10P56693 466 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 CAP1Q01518 475 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 NMIQ13287 307 aaPredicted RBP26.28■■□□□ 1.8
SRM-201ENST00000376957 COG2Q14746 738 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 VCPKMTQ9H867 229 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 BIN2Q9UBW5 565 aaPredicted RBP26.28■■□□□ 1.8
SRM-201ENST00000376957 RABGAP1Q9Y3P9 1069 aa26.28■■□□□ 1.8
SRM-201ENST00000376957 RAD21O60216 631 aa26.27■■□□□ 1.8
SRM-201ENST00000376957 CTGFP29279 349 aa26.27■■□□□ 1.8
SRM-201ENST00000376957 MAPK4P31152 587 aa26.27■■□□□ 1.8
SRM-201ENST00000376957 GRK4P32298 578 aa26.27■■□□□ 1.8
SRM-201ENST00000376957 MLLT1Q03111 559 aaPredicted RBP26.27■■□□□ 1.8
SRM-201ENST00000376957 ALX1Q15699 326 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms