RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 NOLC1Q14978 699 aaKnown RBP eCLIP24.95■■□□□ 1.58
RNF39-202ENST00000376751 NPY5RQ15761 445 aa24.95■■□□□ 1.58
RNF39-202ENST00000376751 NAT10Q9H0A0 1025 aaKnown RBP24.95■■□□□ 1.58
RNF39-202ENST00000376751 CLIP2Q9UDT6 1046 aa24.95■■□□□ 1.58
RNF39-202ENST00000376751 POLLQ9UGP5 575 aa24.95■■□□□ 1.58
RNF39-202ENST00000376751 KCNH3Q9ULD8 1083 aa24.95■■□□□ 1.58
RNF39-202ENST00000376751 R3HCC1Q9Y3T6 440 aaKnown RBP24.95■■□□□ 1.58
RNF39-202ENST00000376751 ATP2B1P20020 1258 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 RBM6P78332 1123 aaKnown RBP24.94■■□□□ 1.58
RNF39-202ENST00000376751 PNOCQ13519 176 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 METTL16Q86W50 562 aaKnown RBP24.94■■□□□ 1.58
RNF39-202ENST00000376751 KIAA1524Q8TCG1 905 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 TGFBRAP1Q8WUH2 860 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 BPIFA3Q9BQP9 254 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 IL17RBQ9NRM6 502 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 SPTLC3Q9NUV7 552 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 TUBE1Q9UJT0 475 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 KRT2P35908 639 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 CCDC144BQ3MJ40 725 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 LONRF3Q496Y0 759 aa24.94■■□□□ 1.58
RNF39-202ENST00000376751 CTCFLQ8NI51 663 aaPredicted RBP24.94■■□□□ 1.58
RNF39-202ENST00000376751 TFAP4Q01664 338 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 NOM1Q5C9Z4 860 aaKnown RBP24.93■■□□□ 1.58
RNF39-202ENST00000376751 TBC1D16Q8TBP0 767 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 MRFAP1L1Q96HT8 127 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 PODXL2Q9NZ53 605 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 BBOX1O75936 387 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 BAG3O95817 575 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 XBP1P17861 261 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 LRMPQ12912 555 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 ZRSR1Q15695 479 aaKnown RBP24.93■■□□□ 1.58
RNF39-202ENST00000376751 TXNRD1Q16881 649 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 KRBA2Q6ZNG9 492 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 MAPKAPK5Q8IW41 473 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 SLC44A5Q8NCS7 719 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 TNFRSF25Q93038 417 aa24.93■■□□□ 1.58
RNF39-202ENST00000376751 KLRG2A4D1S0 409 aaPredicted RBP24.92■■□□□ 1.58
RNF39-202ENST00000376751 WNT7AO00755 349 aa24.92■■□□□ 1.58
RNF39-202ENST00000376751 BTDP43251 543 aa24.92■■□□□ 1.58
RNF39-202ENST00000376751 ISM2Q6H9L7 571 aa24.92■■□□□ 1.58
RNF39-202ENST00000376751 CRAMP1Q96RY5 1269 aa24.92■■□□□ 1.58
RNF39-202ENST00000376751 SAP30BPQ9UHR5 308 aaKnown RBP24.92■■□□□ 1.58
RNF39-202ENST00000376751 LDHCP07864 332 aa24.91■■□□□ 1.58
RNF39-202ENST00000376751 VEGFAP15692 232 aaPredicted RBP24.91■■□□□ 1.58
RNF39-202ENST00000376751 FOXN1O15353 648 aa24.91■■□□□ 1.58
RNF39-202ENST00000376751 PLCD1P51178 756 aa24.91■■□□□ 1.58
RNF39-202ENST00000376751 NOL10Q9BSC4 688 aaKnown RBP24.91■■□□□ 1.58
RNF39-202ENST00000376751 NCAPHQ15003 741 aa24.9■■□□□ 1.58
RNF39-202ENST00000376751 SRPRBQ9Y5M8 271 aaKnown RBP24.9■■□□□ 1.58
RNF39-202ENST00000376751 USP17L3A6NCW0 530 aa24.89■■□□□ 1.58
RNF39-202ENST00000376751 USP17L4A6NCW7 530 aa24.89■■□□□ 1.58
RNF39-202ENST00000376751 ZNF827Q17R98 1081 aa24.89■■□□□ 1.58
RNF39-202ENST00000376751 USP17L1Q7RTZ2 530 aa24.89■■□□□ 1.58
RNF39-202ENST00000376751 FOXP4Q8IVH2 680 aaPredicted RBP24.89■■□□□ 1.58
RNF39-202ENST00000376751 GPR75-ASB3A0A0A6YYF3 556 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 TRIM75PA6NK02 468 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 ADAMTS3O15072 1205 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 USP49Q70CQ1 688 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 ZNF579Q8NAF0 562 aaKnown RBP24.89■■□□□ 1.57
RNF39-202ENST00000376751 CNNM3Q8NE01 707 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 ANKS1AQ92625 1134 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 KAT14Q9H8E8 782 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 CEP131Q9UPN4 1083 aa24.89■■□□□ 1.57
RNF39-202ENST00000376751 SNED1Q8TER0 1413 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 MYH1P12882 1939 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 SCG2P13521 617 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 MDM2Q00987 491 aaPredicted RBP24.88■■□□□ 1.57
RNF39-202ENST00000376751 MFSD14BQ5SR56 506 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 DGKHQ86XP1 1220 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 PNMA1Q8ND90 353 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 CSRNP2Q9H175 543 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 MKNK2Q9HBH9 465 aa24.88■■□□□ 1.57
RNF39-202ENST00000376751 NRXN2Q9P2S2 1712 aa24.87■■□□□ 1.57
RNF39-202ENST00000376751 RASA1P20936 1047 aa24.87■■□□□ 1.57
RNF39-202ENST00000376751 PFKFB3Q16875 520 aaPredicted RBP24.87■■□□□ 1.57
RNF39-202ENST00000376751 CACTINQ8WUQ7 758 aaKnown RBP24.87■■□□□ 1.57
RNF39-202ENST00000376751 FAM13BQ9NYF5 915 aa24.87■■□□□ 1.57
RNF39-202ENST00000376751 C6orf229H3BNL8 230 aa24.87■■□□□ 1.57
RNF39-202ENST00000376751 PPEF1O14829 653 aaPredicted RBP24.87■■□□□ 1.57
RNF39-202ENST00000376751 TEX11Q8IYF3 940 aa24.87■■□□□ 1.57
RNF39-202ENST00000376751 STAG2Q8N3U4 1231 aa24.87■■□□□ 1.57
RNF39-202ENST00000376751 MORC2Q9Y6X9 1032 aaPredicted RBP24.87■■□□□ 1.57
RNF39-202ENST00000376751 FOCADQ5VW36 1801 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 TERF1P54274 439 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 RHBDL3P58872 404 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 SLC35G1Q2M3R5 365 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 AMOTL1Q8IY63 956 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 SERTAD1Q9UHV2 236 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 PCDHA5Q9Y5H7 936 aa24.86■■□□□ 1.57
RNF39-202ENST00000376751 POLR2DO15514 142 aaKnown RBP24.85■■□□□ 1.57
RNF39-202ENST00000376751 TPM2P07951 284 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 PRR29P0C7W0 189 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 KIF5BP33176 963 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 GRM4Q14833 912 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 ARID5BQ14865 1188 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 HSD3B7Q9H2F3 369 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 BRMS1Q9HCU9 246 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 GAKO14976 1311 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 FLT1P17948 1338 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 TSPY3P0CV98 308 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms