RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 RBSNQ9H1K0 784 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 DDX60LQ5H9U9 1706 aaKnown RBP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 BTBD18B2RXH4 712 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 PRPF3O43395 683 aaKnown RBP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 MMP1P03956 469 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 NT5C2P49902 561 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 FKBP1AP62942 108 aaKnown RBP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 TCP10Q12799 353 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 SF3A1Q15459 793 aaKnown RBP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 CCDC178Q5BJE1 867 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 LARGE2Q8N3Y3 721 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 TCP11L1Q9NUJ3 509 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 VPS54Q9P1Q0 977 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 KIF5BP33176 963 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 PKN1Q16512 942 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 DIS3L2Q8IYB7 885 aaKnown RBP14.94□□□□□ -0.02
TRIM40-206ENST00000376724 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 LINC00301Q8NCQ3 95 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 TMEM47Q9BQJ4 181 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 TSPY26PQ9H489 355 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 FOCADQ5VW36 1801 aa14.94□□□□□ -0.02
TRIM40-206ENST00000376724 NR1I2O75469 434 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 RAD17O75943 681 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 LETM1O95202 739 aaPredicted RBP14.93□□□□□ -0.02
TRIM40-206ENST00000376724 XBP1P17861 261 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 U2AF2P26368 475 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRIM40-206ENST00000376724 POLD1P28340 1107 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 ANO1Q5XXA6 986 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 CCAR1Q8IX12 1150 aaKnown RBP14.93□□□□□ -0.02
TRIM40-206ENST00000376724 STAG2Q8N3U4 1231 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 NEDD1Q8NHV4 660 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 ANKS1AQ92625 1134 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 PCDHA7Q9UN72 937 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 CNTNAP5Q8WYK1 1306 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 NASPP49321 788 aaPredicted RBP14.93□□□□□ -0.02
TRIM40-206ENST00000376724 R3HDM1Q15032 1099 aaKnown RBP14.93□□□□□ -0.02
TRIM40-206ENST00000376724 GRIPAP1Q4V328 841 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 RNF214Q8ND24 703 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 NUP62CLQ9H1M0 184 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 PIM2Q9P1W9 311 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 SERPINB13Q9UIV8 391 aa14.93□□□□□ -0.02
TRIM40-206ENST00000376724 SPTLC2O15270 562 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 SLURP2P0DP57 97 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 GABPAQ06546 454 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 NR5A1Q13285 461 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 NOSTRINQ8IVI9 506 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
TRIM40-206ENST00000376724 OXER1Q8TDS5 423 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 SHISA4Q96DD7 197 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 PSMD1Q99460 953 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 MRIQ9BWK5 157 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 SERPINA10Q9UK55 444 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 YEATS4O95619 227 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 HDLBPQ00341 1268 aaKnown RBP14.92□□□□□ -0.02
TRIM40-206ENST00000376724 RASGRP2Q7LDG7 609 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 KCNG4Q8TDN1 519 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
TRIM40-206ENST00000376724 TDRD3Q9H7E2 651 aaKnown RBP14.92□□□□□ -0.02
TRIM40-206ENST00000376724 MYH6P13533 1939 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 AKR1B1P15121 316 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 MARCKSP29966 332 aaPredicted RBP14.91□□□□□ -0.02
TRIM40-206ENST00000376724 EIF6P56537 245 aaKnown RBP14.91□□□□□ -0.02
TRIM40-206ENST00000376724 TGFB2P61812 414 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 GRM4Q14833 912 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 TNMDQ9H2S6 317 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 GOLPH3LQ9H4A5 285 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
TRIM40-206ENST00000376724 PSMD14O00487 310 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 CCDC73Q6ZRK6 1079 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 CKAP2LQ8IYA6 745 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 FSIP1Q8NA03 581 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 FOXP1Q9H334 677 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 DDX19AQ9NUU7 478 aaKnown RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 FAM196BA6NMK8 535 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 SCG2P13521 617 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 VEGFAP15692 232 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 DALRD3Q5D0E6 543 aaKnown RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 CLEC10AQ8IUN9 316 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 PRMT6Q96LA8 375 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 MAP3K14Q99558 947 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 PHF20Q9BVI0 1012 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 FAM198AQ9UFP1 575 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
TRIM40-206ENST00000376724 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 BAZ2BQ9UIF8 2168 aaKnown RBP14.9□□□□□ -0.02
TRIM40-206ENST00000376724 ZNF646O15015 1829 aaPredicted RBP14.89□□□□□ -0.03
TRIM40-206ENST00000376724 DDTLA6NHG4 134 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms