RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 SPEF2Q9C093 1822 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 FAM205CA6NFA0 338 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 ZSCAN12O43309 604 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 PRKAB2O43741 272 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
MSH5-203ENST00000375750 RASGRF1Q13972 1273 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 POSTNQ15063 836 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 CC2D1AQ6P1N0 951 aaPredicted RBP17.34■□□□□ 0.37
MSH5-203ENST00000375750 KIFC2Q96AC6 838 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 PARD6BQ9BYG5 372 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 TOMM22Q9NS69 142 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 ARGLU1Q9NWB6 273 aaPredicted RBP17.34■□□□□ 0.37
MSH5-203ENST00000375750 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.36
MSH5-203ENST00000375750 CCP110O43303 1012 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 OAS2P29728 719 aaKnown RBP17.33■□□□□ 0.36
MSH5-203ENST00000375750 MAP3K9P80192 1104 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 NFIXQ14938 502 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 KLHL10Q6JEL2 608 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 TICAM2Q86XR7 235 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 SPATA5Q8NB90 893 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 SMARCE1Q969G3 411 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 EPB41L4AQ9HCS5 686 aaPredicted RBP17.33■□□□□ 0.36
MSH5-203ENST00000375750 TMEM51Q9NW97 253 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.36
MSH5-203ENST00000375750 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 hCG_1642624A0A1W2PR95 340 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 CCDC66A2RUB6 948 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 SMIM22K7EJ46 135 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 PDE6AP16499 860 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 DIS3L2Q8IYB7 885 aaKnown RBP17.33■□□□□ 0.36
MSH5-203ENST00000375750 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.361e-12■■■■□ 21.6
MSH5-203ENST00000375750 BSDC1Q9NW68 430 aaPredicted RBP17.33■□□□□ 0.36
MSH5-203ENST00000375750 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.36
MSH5-203ENST00000375750 FAM237AA0A1B0GTK4 181 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 CDKL5O76039 1030 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 NOSTRINQ8IVI9 506 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 SMYD4Q8IYR2 804 aaPredicted RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 PROM2Q8N271 834 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 FBXO2Q9UK22 296 aaPredicted RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 TAF3Q5VWG9 929 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 CPLX2Q6PUV4 134 aaKnown RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 CCDC12Q8WUD4 166 aaPredicted RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 ARMT1Q9H993 441 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 PUF60Q9UHX1 559 aaKnown RBP17.32■□□□□ 0.36
MSH5-203ENST00000375750 SLC12A7Q9Y666 1083 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 LAMB2P55268 1798 aa17.32■□□□□ 0.36
MSH5-203ENST00000375750 ABL1P00519 1130 aa17.31■□□□□ 0.36
MSH5-203ENST00000375750 ZNF18P17022 549 aa17.31■□□□□ 0.36
MSH5-203ENST00000375750 AFMP43652 599 aa17.31■□□□□ 0.36
MSH5-203ENST00000375750 TTF1Q15361 905 aaPredicted RBP17.31■□□□□ 0.36
MSH5-203ENST00000375750 GYG1P46976 350 aa17.31■□□□□ 0.36
MSH5-203ENST00000375750 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
MSH5-203ENST00000375750 STRBPQ96SI9 672 aaKnown RBP17.31■□□□□ 0.36
MSH5-203ENST00000375750 A0A087X0B3 334 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 STAMQ92783 540 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 TUBB4AP04350 444 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
MSH5-203ENST00000375750 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 WDR19Q8NEZ3 1342 aa17.3■□□□□ 0.36
MSH5-203ENST00000375750 VGLL3A8MV65 326 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 MBD4O95243 580 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 CD44P16070 742 aaKnown RBP17.29■□□□□ 0.36
MSH5-203ENST00000375750 CAPN2P17655 700 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 TM4SF1P30408 202 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 MORC3Q14149 939 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 RSRC2Q7L4I2 434 aaKnown RBP17.29■□□□□ 0.36
MSH5-203ENST00000375750 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 SRRTQ9BXP5 876 aaKnown RBP17.29■□□□□ 0.36
MSH5-203ENST00000375750 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 MMP1P03956 469 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 TXNRD1Q16881 649 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 ZNF772Q68DY9 489 aaPredicted RBP17.29■□□□□ 0.36
MSH5-203ENST00000375750 SLC51AQ86UW1 340 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 MAGEB6Q8N7X4 407 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 ECM29Q5VYK3 1845 aa17.29■□□□□ 0.36
MSH5-203ENST00000375750 STX10O60499 249 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 FMNL1O95466 1100 aaPredicted RBP17.28■□□□□ 0.36
MSH5-203ENST00000375750 GYS1P13807 737 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 RBL2Q08999 1139 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 IFNL3Q8IZI9 196 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
MSH5-203ENST00000375750 ZFP91Q96JP5 570 aaPredicted RBP17.28■□□□□ 0.36
MSH5-203ENST00000375750 SUGCTQ9HAC7 445 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 H3BQF6 201 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 WNT7AO00755 349 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 PTPREP23469 700 aa17.28■□□□□ 0.36
MSH5-203ENST00000375750 SARSP49591 514 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms