RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-202ENST00000375597 MMP1P03956 469 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 CYP2D6P10635 497 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 CUL4BQ13620 913 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 ADAM21Q9UKJ8 722 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 ADAMTS3O15072 1205 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 SLC5A1P13866 664 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 IL2RBP14784 551 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-202ENST00000375597 MED15Q96RN5 788 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 TMEM51Q9NW97 253 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 IKBKBO14920 756 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 VSNL1P62760 191 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 PPARAQ07869 468 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 DPYDQ12882 1025 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 TRIM47Q96LD4 638 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 AK7Q96M32 723 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
MCF2L-202ENST00000375597 KLK7P49862 253 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 CTAGE15A4D2H0 777 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 ZNF185O15231 689 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 CTAGE8P0CG41 777 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 CTAGE6Q86UF2 777 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 CTAGE4Q8IX94 777 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 ZHX3Q9H4I2 956 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
MCF2L-202ENST00000375597 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-202ENST00000375597 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 USP17L21D6R901 530 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 XBP1P17861 261 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
MCF2L-202ENST00000375597 SYCP1Q15431 976 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-202ENST00000375597 TANGO6Q9C0B7 1094 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 KANSL2Q9H9L4 492 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-202ENST00000375597 NIP7Q9Y221 180 aaKnown RBP eCLIP13.34□□□□□ -0.27
MCF2L-202ENST00000375597 CRYBG1Q9Y4K1 1723 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 GSG1L2A8MUP6 293 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 ANKRD20A12PQ8NF67 263 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 PHLPP2Q6ZVD8 1323 aa13.34□□□□□ -0.27
MCF2L-202ENST00000375597 TSPY2A6NKD2 308 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 CYP2C19P33261 490 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 NTRK3Q16288 839 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 HEATR3Q7Z4Q2 680 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 NELFBQ8WX92 580 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 PAGE5Q96GU1 130 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 TUBE1Q9UJT0 475 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 MRFAP1Q9Y605 127 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 DUSP10Q9Y6W6 482 aa13.33□□□□□ -0.27
MCF2L-202ENST00000375597 PATL2C9JE40 543 aaKnown RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 IDEP14735 1019 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 GPR101Q96P66 508 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 BTG4Q9NY30 223 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 EHD2Q9NZN4 543 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 MED1Q15648 1581 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 KRT2P35908 639 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 STAT6P42226 847 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 RILPL1Q5EBL4 403 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 BRMS1Q9HCU9 246 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
MCF2L-202ENST00000375597 ADGRG1Q9Y653 693 aa13.33□□□□□ -0.28
MCF2L-202ENST00000375597 PPP6R2O75170 966 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 TXLNAP40222 546 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 USP5P45974 858 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 TTC38Q5R3I4 469 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 STX10O60499 249 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 DEXIO95424 95 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 FMNL1O95466 1100 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 KRT31Q15323 416 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 PUM3Q15397 648 aaKnown RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 KRT26Q7Z3Y9 468 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 WASF1Q92558 559 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 HPSEQ9Y251 543 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 PTPREP23469 700 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms