RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 ACER1Q8TDN7 264 aa25■■□□□ 1.59
MAP1LC3A-202ENST00000374837 IL25Q9H293 177 aa25■■□□□ 1.59
MAP1LC3A-202ENST00000374837 C19orf81C9J6K1 198 aa24.99■■□□□ 1.59
MAP1LC3A-202ENST00000374837 LAMB1P07942 1786 aa24.99■■□□□ 1.59
MAP1LC3A-202ENST00000374837 NOM1Q5C9Z4 860 aaKnown RBP24.99■■□□□ 1.59
MAP1LC3A-202ENST00000374837 PROCA1Q8NCQ7 364 aaPredicted RBP24.99■■□□□ 1.59
MAP1LC3A-202ENST00000374837 PRDM1O75626 825 aa24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 SLC3A2P08195 630 aaKnown RBP24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 CTDSPL2Q05D32 466 aa24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 TREML2Q5T2D2 321 aa24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 ZNF287Q9HBT7 754 aa24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 ANAPC4Q9UJX5 808 aa24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 AGTPBP1Q9UPW5 1226 aa24.98■■□□□ 1.59
MAP1LC3A-202ENST00000374837 PDE4BQ07343 736 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 BMP2KLQ5H9B9 411 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 SIAH1Q8IUQ4 282 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 ZNF296Q8WUU4 475 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 RUFY2Q8WXA3 655 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 EMILIN3Q9NT22 766 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 TMOD4Q9NZQ9 345 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 SLC45A1Q9Y2W3 748 aa24.97■■□□□ 1.59
MAP1LC3A-202ENST00000374837 PHIPQ8WWQ0 1821 aa24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 ZMYM6O95789 1325 aa24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 USP17L2Q6R6M4 530 aa24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 CLEC10AQ8IUN9 316 aa24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 ZNF444Q8N0Y2 327 aaPredicted RBP24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 INCENPQ9NQS7 918 aa24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 TACC3Q9Y6A5 838 aa24.96■■□□□ 1.59
MAP1LC3A-202ENST00000374837 RAD50Q92878 1312 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 A0A1W2PRG0 241 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 TLR2O60603 784 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 FKTNO75072 461 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 CYP2C8P10632 490 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 FEZ1Q99689 392 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 DSCC1Q9BVC3 393 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 KIAA1683Q9H0B3 1180 aa24.95■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ATAD5Q96QE3 1844 aa24.94■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ICA1Q05084 483 aa24.94■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ZYXQ15942 572 aaKnown RBP24.94■■□□□ 1.58
MAP1LC3A-202ENST00000374837 PARK7Q99497 189 aaKnown RBP24.94■■□□□ 1.58
MAP1LC3A-202ENST00000374837 KANSL2Q9H9L4 492 aa24.94■■□□□ 1.58
MAP1LC3A-202ENST00000374837 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.94■■□□□ 1.58
MAP1LC3A-202ENST00000374837 SGSM2O43147 1006 aa24.93■■□□□ 1.58
MAP1LC3A-202ENST00000374837 USP14P54578 494 aa24.93■■□□□ 1.58
MAP1LC3A-202ENST00000374837 HAND2P61296 217 aa24.93■■□□□ 1.58
MAP1LC3A-202ENST00000374837 C12orf42Q96LP6 360 aa24.93■■□□□ 1.58
MAP1LC3A-202ENST00000374837 FGRP09769 529 aa24.92■■□□□ 1.58
MAP1LC3A-202ENST00000374837 EEF2P13639 858 aaKnown RBP24.92■■□□□ 1.58
MAP1LC3A-202ENST00000374837 PABPC4Q13310 644 aaKnown RBP eCLIP24.92■■□□□ 1.58
MAP1LC3A-202ENST00000374837 FAM47AQ5JRC9 791 aa24.92■■□□□ 1.58
MAP1LC3A-202ENST00000374837 C17orf99Q6UX52 265 aa24.92■■□□□ 1.58
MAP1LC3A-202ENST00000374837 PDE4DIPQ5VU43 2346 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ADGRA2Q96PE1 1338 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 HOXA7P31268 230 aaPredicted RBP24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 TFAP4Q01664 338 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 SP3Q02447 781 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 NBPF3Q9H094 633 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ARHGEF10LQ9HCE6 1279 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 CPA4Q9UI42 421 aa24.91■■□□□ 1.58
MAP1LC3A-202ENST00000374837 IGKV6D-41A0A0C4DH26 115 aa24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 OSBPP22059 807 aa24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ATP2B2Q01814 1243 aa24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 NEDD1Q8NHV4 660 aa24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ASCC2Q9H1I8 757 aaPredicted RBP24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 PNMA3Q9UL41 463 aa24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 TMX2Q9Y320 296 aa24.9■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ZNF213O14771 459 aa24.89■■□□□ 1.58
MAP1LC3A-202ENST00000374837 ORC4O43929 436 aa24.89■■□□□ 1.58
MAP1LC3A-202ENST00000374837 TSPY3P0CV98 308 aa24.89■■□□□ 1.58
MAP1LC3A-202ENST00000374837 TSPY8P0CW00 308 aa24.89■■□□□ 1.58
MAP1LC3A-202ENST00000374837 PTH1RQ03431 593 aa24.89■■□□□ 1.58
MAP1LC3A-202ENST00000374837 CTNNA3Q9UI47 895 aa24.89■■□□□ 1.58
MAP1LC3A-202ENST00000374837 KIAA1755Q5JYT7 1200 aa24.88■■□□□ 1.57
MAP1LC3A-202ENST00000374837 AKNAD1Q5T1N1 836 aa24.88■■□□□ 1.57
MAP1LC3A-202ENST00000374837 TBC1D10CQ8IV04 446 aa24.88■■□□□ 1.57
MAP1LC3A-202ENST00000374837 SH2D4AQ9H788 454 aa24.88■■□□□ 1.57
MAP1LC3A-202ENST00000374837 NYAP2Q9P242 653 aa24.88■■□□□ 1.57
MAP1LC3A-202ENST00000374837 RANBP6O60518 1105 aaKnown RBP24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 BCRP11274 1271 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 VCAM1P19320 739 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 CD99L2Q8TCZ2 262 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 SMCR8Q8TEV9 937 aaPredicted RBP24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 STAG1Q8WVM7 1258 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 CEP95Q96GE4 821 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 P2RX7Q99572 595 aaKnown RBP24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 ESYT1Q9BSJ8 1104 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 VCPKMTQ9H867 229 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 TOMM22Q9NS69 142 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 MTMR4Q9NYA4 1195 aa24.87■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L15C9J2P7 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L13C9JLJ4 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L11C9JVI0 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L18D6R9N7 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L22D6RA61 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L17D6RBQ6 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L19D6RCP7 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L20D6RJB6 530 aa24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 IRX3P78415 501 aaPredicted RBP24.86■■□□□ 1.57
MAP1LC3A-202ENST00000374837 USP17L24Q0WX57 530 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms