RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RASA1P20936 1047 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 CMA1P23946 247 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 TOB1P50616 345 aaPredicted RBP22.61■■□□□ 1.21
HDAC1-201ENST00000373548 EZH2Q15910 746 aaKnown RBP22.61■■□□□ 1.21
HDAC1-201ENST00000373548 HS1BP3Q53T59 392 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 TMX4Q9H1E5 349 aaPredicted RBP22.61■■□□□ 1.21
HDAC1-201ENST00000373548 TCP11L1Q9NUJ3 509 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 SLX4Q8IY92 1834 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 USP17L3A6NCW0 530 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 USP17L4A6NCW7 530 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 SLC15A2Q16348 729 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 USP17L1Q7RTZ2 530 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 ZNF444Q8N0Y2 327 aaPredicted RBP22.6■■□□□ 1.21
HDAC1-201ENST00000373548 KAT14Q9H8E8 782 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 TSPY3P0CV98 308 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 TSPY8P0CW00 308 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 C16orf86Q6ZW13 317 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 JMYQ8N9B5 988 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 CAMKK2Q96RR4 588 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 PHF20Q9BVI0 1012 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.6■■□□□ 1.21
HDAC1-201ENST00000373548 SNED1Q8TER0 1413 aa22.6■■□□□ 1.21
HDAC1-201ENST00000373548 XBP1P17861 261 aa22.59■■□□□ 1.21
HDAC1-201ENST00000373548 EN1Q05925 392 aaPredicted RBP22.59■■□□□ 1.21
HDAC1-201ENST00000373548 CCDC178Q5BJE1 867 aa22.59■■□□□ 1.21
HDAC1-201ENST00000373548 STYK1Q6J9G0 422 aa22.59■■□□□ 1.21
HDAC1-201ENST00000373548 MXD3Q9BW11 206 aa22.59■■□□□ 1.21
HDAC1-201ENST00000373548 F8W031 263 aaPredicted RBP22.58■■□□□ 1.21
HDAC1-201ENST00000373548 CDK8P49336 464 aa22.58■■□□□ 1.21
HDAC1-201ENST00000373548 PNMA1Q8ND90 353 aa22.58■■□□□ 1.21
HDAC1-201ENST00000373548 CBX8Q9HC52 389 aa22.58■■□□□ 1.21
HDAC1-201ENST00000373548 ADAMTSL1Q8N6G6 1762 aa22.58■■□□□ 1.21
HDAC1-201ENST00000373548 H0YIN7 160 aa22.58■■□□□ 1.2
HDAC1-201ENST00000373548 ADCY5O95622 1261 aa22.58■■□□□ 1.2
HDAC1-201ENST00000373548 PFKFB1P16118 471 aa22.58■■□□□ 1.2
HDAC1-201ENST00000373548 RILPL1Q5EBL4 403 aa22.58■■□□□ 1.2
HDAC1-201ENST00000373548 EYA3Q99504 573 aa22.58■■□□□ 1.2
HDAC1-201ENST00000373548 ZNF287Q9HBT7 754 aa22.58■■□□□ 1.2
HDAC1-201ENST00000373548 TTF2Q9UNY4 1162 aaKnown RBP22.58■■□□□ 1.2
HDAC1-201ENST00000373548 AP5Z1O43299 807 aa22.57■■□□□ 1.2
HDAC1-201ENST00000373548 KIF5BP33176 963 aa22.57■■□□□ 1.2
HDAC1-201ENST00000373548 LUZP1Q86V48 1076 aa22.57■■□□□ 1.2
HDAC1-201ENST00000373548 DNAJC25Q9H1X3 360 aa22.57■■□□□ 1.2
HDAC1-201ENST00000373548 SHC4Q6S5L8 630 aa22.57■■□□□ 1.2
HDAC1-201ENST00000373548 ZNF202O95125 648 aa22.56■■□□□ 1.2
HDAC1-201ENST00000373548 SDF4Q9BRK5 362 aa22.56■■□□□ 1.2
HDAC1-201ENST00000373548 STK32BQ9NY57 414 aa22.56■■□□□ 1.2
HDAC1-201ENST00000373548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.55■■□□□ 1.2
HDAC1-201ENST00000373548 G3V3G9 751 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 CUTAO60888 179 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 CHRNA5P30532 468 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 KRT2P35908 639 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 GRM4Q14833 912 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 ZSCAN30Q86W11 494 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 CLIC6Q96NY7 704 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 HPSEQ9Y251 543 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 ZNF165P49910 485 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 NPY5RQ15761 445 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 STX1AQ16623 288 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 DBNDD1Q9H9R9 158 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 CABP5Q9NP86 173 aa22.55■■□□□ 1.2
HDAC1-201ENST00000373548 FAM237AA0A1B0GTK4 181 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 SCG2P13521 617 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 RESP18Q5W5W9 173 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 NEDD1Q8NHV4 660 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 ERCC4Q92889 916 aaPredicted RBP22.54■■□□□ 1.2
HDAC1-201ENST00000373548 TMEM47Q9BQJ4 181 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 CCDC39Q9UFE4 941 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 PCDHB6Q9Y5E3 794 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 FAM205CA6NFA0 338 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 CAVIN2O95810 425 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 SCNN1DP51172 638 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 PFKFB3Q16875 520 aaPredicted RBP22.54■■□□□ 1.2
HDAC1-201ENST00000373548 C11orf57Q6ZUT1 292 aaPredicted RBP22.54■■□□□ 1.2
HDAC1-201ENST00000373548 PODNQ7Z5L7 613 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 STAG2Q8N3U4 1231 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 STX8Q9UNK0 236 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
HDAC1-201ENST00000373548 ZNF646O15015 1829 aaPredicted RBP22.53■■□□□ 1.2
HDAC1-201ENST00000373548 VEGFAP15692 232 aaPredicted RBP22.53■■□□□ 1.2
HDAC1-201ENST00000373548 PLCB2Q00722 1185 aa22.53■■□□□ 1.2
HDAC1-201ENST00000373548 PICALMQ13492 652 aa22.53■■□□□ 1.2
HDAC1-201ENST00000373548 EARS2Q5JPH6 523 aaKnown RBP22.53■■□□□ 1.2
HDAC1-201ENST00000373548 KRI1Q8N9T8 703 aaKnown RBP22.53■■□□□ 1.2
HDAC1-201ENST00000373548 KCNQ5Q9NR82 932 aa22.53■■□□□ 1.2
HDAC1-201ENST00000373548 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
HDAC1-201ENST00000373548 CLCN1P35523 988 aa22.52■■□□□ 1.2
HDAC1-201ENST00000373548 PIBF1Q8WXW3 757 aa22.52■■□□□ 1.2
HDAC1-201ENST00000373548 TNFRSF25Q93038 417 aa22.52■■□□□ 1.2
HDAC1-201ENST00000373548 DDX4Q9NQI0 724 aaKnown RBP22.52■■□□□ 1.2
HDAC1-201ENST00000373548 A0A087WWV3 80 aa22.52■■□□□ 1.2
HDAC1-201ENST00000373548 SYKP43405 635 aa22.52■■□□□ 1.2
HDAC1-201ENST00000373548 HHIPL2Q6UWX4 724 aa22.52■■□□□ 1.2
HDAC1-201ENST00000373548 ZNF219Q9P2Y4 722 aaPredicted RBP22.52■■□□□ 1.2
HDAC1-201ENST00000373548 FBXO2Q9UK22 296 aaPredicted RBP22.52■■□□□ 1.2
HDAC1-201ENST00000373548 NOL7Q9UMY1 257 aaKnown RBP22.52■■□□□ 1.2
HDAC1-201ENST00000373548 MYH8P13535 1937 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 CNKSR1Q969H4 720 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 TIGD1Q96MW7 591 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms