RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 DSCC1Q9BVC3 393 aa24.09■■□□□ 1.45
SYNC-201ENST00000373484 GREB1LQ9C091 1923 aaPredicted RBP24.09■■□□□ 1.45
SYNC-201ENST00000373484 IRF6O14896 467 aa24.08■■□□□ 1.45
SYNC-201ENST00000373484 MCM2P49736 904 aa24.08■■□□□ 1.45
SYNC-201ENST00000373484 SHROOM1Q2M3G4 852 aaPredicted RBP24.08■■□□□ 1.45
SYNC-201ENST00000373484 LMBRD1Q9NUN5 540 aa24.08■■□□□ 1.45
SYNC-201ENST00000373484 ZBTB21Q9ULJ3 1066 aa24.08■■□□□ 1.45
SYNC-201ENST00000373484 ZHX2Q9Y6X8 837 aa24.07■■□□□ 1.44
SYNC-201ENST00000373484 REM2Q8IYK8 340 aaPredicted RBP24.07■■□□□ 1.44
SYNC-201ENST00000373484 ANAPC4Q9UJX5 808 aa24.07■■□□□ 1.44
SYNC-201ENST00000373484 MANSC4A6NHS7 340 aaPredicted RBP24.06■■□□□ 1.44
SYNC-201ENST00000373484 GH2P01242 217 aa24.06■■□□□ 1.44
SYNC-201ENST00000373484 ABCB5Q2M3G0 1257 aa24.06■■□□□ 1.44
SYNC-201ENST00000373484 CCDC84Q86UT8 332 aaPredicted RBP24.06■■□□□ 1.44
SYNC-201ENST00000373484 MS4A4AQ96JQ5 239 aa24.06■■□□□ 1.44
SYNC-201ENST00000373484 KCNH4Q9UQ05 1017 aa24.06■■□□□ 1.44
SYNC-201ENST00000373484 AFG3L2Q9Y4W6 797 aa24.06■■□□□ 1.44
SYNC-201ENST00000373484 STK11IPQ8N1F8 1099 aa24.05■■□□□ 1.44
SYNC-201ENST00000373484 ESYT1Q9BSJ8 1104 aa24.05■■□□□ 1.44
SYNC-201ENST00000373484 USP17L5A8MUK1 530 aa24.05■■□□□ 1.44
SYNC-201ENST00000373484 SLC3A2P08195 630 aaKnown RBP24.05■■□□□ 1.44
SYNC-201ENST00000373484 GTF2A2P52657 109 aa24.05■■□□□ 1.44
SYNC-201ENST00000373484 SREBF2Q12772 1141 aa24.05■■□□□ 1.44
SYNC-201ENST00000373484 HSP90AA2PQ14568 343 aaPredicted RBP24.05■■□□□ 1.44
SYNC-201ENST00000373484 CCDC17Q96LX7 622 aa24.05■■□□□ 1.44
SYNC-201ENST00000373484 TM4SF4P48230 202 aa24.04■■□□□ 1.44
SYNC-201ENST00000373484 MAP2K1Q02750 393 aaPredicted RBP24.04■■□□□ 1.44
SYNC-201ENST00000373484 PDLIM2Q96JY6 352 aa24.04■■□□□ 1.44
SYNC-201ENST00000373484 ZNF287Q9HBT7 754 aa24.04■■□□□ 1.44
SYNC-201ENST00000373484 CABP5Q9NP86 173 aa24.04■■□□□ 1.44
SYNC-201ENST00000373484 FOXD4L1Q9NU39 408 aa24.04■■□□□ 1.44
SYNC-201ENST00000373484 TESPA1A2RU30 521 aaPredicted RBP24.03■■□□□ 1.44
SYNC-201ENST00000373484 EPB41L2O43491 1005 aaKnown RBP24.03■■□□□ 1.44
SYNC-201ENST00000373484 RASA1P20936 1047 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 INHBEP58166 350 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 CTDSPL2Q05D32 466 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 PDE4BQ07343 736 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 SNAPC2Q13487 334 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 IL17RAQ96F46 866 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 MKNK2Q9HBH9 465 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 LOC285556D6RIA3 1793 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 CXCL11O14625 94 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 OFD1O75665 1012 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 AKR1B1P15121 316 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 GUCY1A2P33402 732 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 MCM5P33992 734 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 PTH1RQ03431 593 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 ZSCAN23Q3MJ62 389 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.03■■□□□ 1.44
SYNC-201ENST00000373484 AS3MTQ9HBK9 375 aa24.03■■□□□ 1.44
SYNC-201ENST00000373484 MCTP1Q6DN14 999 aa24.02■■□□□ 1.44
SYNC-201ENST00000373484 TMEM179Q6ZVK1 233 aa24.02■■□□□ 1.44
SYNC-201ENST00000373484 ZNF280CQ8ND82 737 aa24.02■■□□□ 1.44
SYNC-201ENST00000373484 WDR18Q9BV38 432 aa24.02■■□□□ 1.44
SYNC-201ENST00000373484 MPHOSPH10O00566 681 aaKnown RBP24.01■■□□□ 1.43
SYNC-201ENST00000373484 WBP1LQ9NX94 342 aa24.01■■□□□ 1.43
SYNC-201ENST00000373484 CTNNA3Q9UI47 895 aa24.01■■□□□ 1.43
SYNC-201ENST00000373484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.01■■□□□ 1.43
SYNC-201ENST00000373484 CCL15-CCL14A0A0B4J2E2 113 aa24■■□□□ 1.43
SYNC-201ENST00000373484 TRIM75PA6NK02 468 aa24■■□□□ 1.43
SYNC-201ENST00000373484 PRDM1O75626 825 aa24■■□□□ 1.43
SYNC-201ENST00000373484 CETPP11597 493 aa24■■□□□ 1.43
SYNC-201ENST00000373484 HAND2P61296 217 aa24■■□□□ 1.43
SYNC-201ENST00000373484 SEPT2Q15019 361 aa24■■□□□ 1.43
SYNC-201ENST00000373484 CCL15Q16663 113 aa24■■□□□ 1.43
SYNC-201ENST00000373484 BRI3BPQ8WY22 251 aa24■■□□□ 1.43
SYNC-201ENST00000373484 TACC3Q9Y6A5 838 aa24■■□□□ 1.43
SYNC-201ENST00000373484 MYH4Q9Y623 1939 aa24■■□□□ 1.43
SYNC-201ENST00000373484 A0A0G2JLL6 359 aaPredicted RBP24■■□□□ 1.43
SYNC-201ENST00000373484 MBD3O95983 291 aa24■■□□□ 1.43
SYNC-201ENST00000373484 FGRP09769 529 aa24■■□□□ 1.43
SYNC-201ENST00000373484 ANAPC15P60006 121 aa24■■□□□ 1.43
SYNC-201ENST00000373484 SPP2Q13103 211 aa24■■□□□ 1.43
SYNC-201ENST00000373484 PRRT2Q7Z6L0 340 aaPredicted RBP24■■□□□ 1.43
SYNC-201ENST00000373484 NBPF3Q9H094 633 aa24■■□□□ 1.43
SYNC-201ENST00000373484 ZNF213O14771 459 aa23.99■■□□□ 1.43
SYNC-201ENST00000373484 MSNP26038 577 aaKnown RBP23.99■■□□□ 1.43
SYNC-201ENST00000373484 ZNF444Q8N0Y2 327 aaPredicted RBP23.99■■□□□ 1.43
SYNC-201ENST00000373484 MAP4K1Q92918 833 aa23.99■■□□□ 1.43
SYNC-201ENST00000373484 PTPN18Q99952 460 aa23.99■■□□□ 1.43
SYNC-201ENST00000373484 MOGSQ13724 837 aa23.98■■□□□ 1.43
SYNC-201ENST00000373484 IMMTQ16891 758 aaKnown RBP23.98■■□□□ 1.43
SYNC-201ENST00000373484 KIAA1211Q6ZU35 1233 aa23.98■■□□□ 1.43
SYNC-201ENST00000373484 IFNL1Q8IU54 200 aa23.98■■□□□ 1.43
SYNC-201ENST00000373484 LSG1Q9H089 658 aaKnown RBP23.98■■□□□ 1.43
SYNC-201ENST00000373484 INCENPQ9NQS7 918 aa23.98■■□□□ 1.43
SYNC-201ENST00000373484 IGF2BP3O00425 579 aaKnown RBP eCLIP23.98■■□□□ 1.43
SYNC-201ENST00000373484 ORC4O43929 436 aa23.98■■□□□ 1.43
SYNC-201ENST00000373484 ZNF500O60304 480 aaPredicted RBP23.98■■□□□ 1.43
SYNC-201ENST00000373484 TBC1D10CQ8IV04 446 aa23.98■■□□□ 1.43
SYNC-201ENST00000373484 NOL7Q9UMY1 257 aaKnown RBP23.98■■□□□ 1.43
SYNC-201ENST00000373484 U3KPZ7 1027 aaPredicted RBP23.98■■□□□ 1.43
SYNC-201ENST00000373484 AKNAD1Q5T1N1 836 aa23.97■■□□□ 1.43
SYNC-201ENST00000373484 STAG1Q8WVM7 1258 aa23.97■■□□□ 1.43
SYNC-201ENST00000373484 INTS4Q96HW7 963 aaKnown RBP23.97■■□□□ 1.43
SYNC-201ENST00000373484 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.97■■□□□ 1.43
SYNC-201ENST00000373484 PLIN4Q96Q06 1357 aa23.97■■□□□ 1.43
SYNC-201ENST00000373484 PCP11498 1178 aaKnown RBP23.96■■□□□ 1.43
SYNC-201ENST00000373484 BACE1P56817 501 aa23.96■■□□□ 1.43
SYNC-201ENST00000373484 SH3D19Q5HYK7 790 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms