RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 CCDC80Q76M96 950 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 MAIP1Q8WWC4 291 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 MEIS3Q99687 375 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRERF1-203ENST00000372917 PCMTD2Q9NV79 361 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 A6NNZ2 444 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 TMEM232C9JQI7 657 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 STXBP3O00186 592 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
TRERF1-203ENST00000372917 FUT4P22083 530 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 DYNC1I2Q13409 638 aaKnown RBP11.91□□□□□ -0.5
TRERF1-203ENST00000372917 TUBB8Q3ZCM7 444 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 FSIP1Q8NA03 581 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 TRIM11Q96F44 468 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SH3GL2Q99962 352 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 IPO5O00410 1097 aaKnown RBP11.9□□□□□ -0.5
TRERF1-203ENST00000372917 CEP104O60308 925 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 EVI5O60447 810 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 PDHA1P08559 390 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 XBP1P17861 261 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 VCAM1P19320 739 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
TRERF1-203ENST00000372917 ELF3P78545 371 aaPredicted RBP11.9□□□□□ -0.5
TRERF1-203ENST00000372917 SF3A3Q12874 501 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRERF1-203ENST00000372917 MTF1Q14872 753 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 TAF11Q15544 211 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 SPRED3Q2MJR0 410 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
TRERF1-203ENST00000372917 DEPDC5O75140 1603 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 WDR93Q6P2C0 686 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 MYCBPAPQ8TBZ2 947 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 SWAP70Q9UH65 585 aa11.9□□□□□ -0.5
TRERF1-203ENST00000372917 ALDH3A1P30838 453 aa11.9□□□□□ -0.51
TRERF1-203ENST00000372917 SESN3P58005 492 aa11.9□□□□□ -0.51
TRERF1-203ENST00000372917 STK3Q13188 491 aa11.9□□□□□ -0.51
TRERF1-203ENST00000372917 ANKRD20A8PQ5CZ79 823 aa11.9□□□□□ -0.51
TRERF1-203ENST00000372917 TCERG1LQ5VWI1 586 aa11.9□□□□□ -0.51
TRERF1-203ENST00000372917 RASEFQ8IZ41 740 aa11.9□□□□□ -0.51
TRERF1-203ENST00000372917 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.51
TRERF1-203ENST00000372917 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 MGRN1O60291 552 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 VIL1P09327 827 aaKnown RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 ME1P48163 572 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 ZFAND2BQ8WV99 257 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 PCK1P35558 622 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 DHRS1Q96LJ7 313 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 ZSCAN31Q96LW9 406 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 TTC14Q96N46 770 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 C9orf78Q9NZ63 289 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 A6NHS1 94 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 ZKSCAN1P17029 563 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 TBC1D1Q86TI0 1168 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 DZIP1Q86YF9 867 aaKnown RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 CAPZA3Q96KX2 299 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 NAPGQ99747 312 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-203ENST00000372917 OSBPL7Q9BZF2 842 aa11.89□□□□□ -0.51
TRERF1-203ENST00000372917 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 GUCY1B3Q02153 619 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 APBA1Q02410 837 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 NANOGNBQ7Z5D8 188 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 CCDC63Q8NA47 563 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 HVCN1Q96D96 273 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 GOLPH3LQ9H4A5 285 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-203ENST00000372917 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 PAIP2BQ9ULR5 123 aaKnown RBP11.88□□□□□ -0.51
TRERF1-203ENST00000372917 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-203ENST00000372917 DYTNA2CJ06 578 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 HSF2BPO75031 334 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 MYL6BP14649 208 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 USHBP1Q8N6Y0 703 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
TRERF1-203ENST00000372917 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 TULP4Q9NRJ4 1543 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-203ENST00000372917 ADCY1Q08828 1119 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 SDR16C5Q8N3Y7 309 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-203ENST00000372917 OPTNQ96CV9 577 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
TRERF1-203ENST00000372917 PNPLA6Q8IY17 1366 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 LIN7AO14910 233 aaPredicted RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 STX10O60499 249 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 PPP1R37O75864 691 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 ABL2P42684 1182 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 USP14P54578 494 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms