RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 BTDP43251 543 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 ZNF445P59923 1031 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 HAUS3Q68CZ6 603 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 PIGBQ92521 554 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 NUCKS1Q9H1E3 243 aaKnown RBP14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 RHOXF2BP0C7M4 288 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 MORC4Q8TE76 937 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 RHOXF2Q9BQY4 288 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 IQGAP3Q86VI3 1631 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 LRRC23Q53EV4 343 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 GBP7Q8N8V2 638 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 CCDC42Q96M95 316 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 LLPHQ9BRT6 129 aaKnown RBP14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 SLC5A4Q9NY91 659 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 EVCP57679 992 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 CHURC1Q8WUH1 139 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 GABPB1Q06547 395 aaPredicted RBP14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 PROSER3Q2NL68 480 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 CAPZA3Q96KX2 299 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 GUCA1BQ9UMX6 200 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 BBOX1O75936 387 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 PPP2R3AQ06190 1150 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 TUBB2AQ13885 445 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 TUBB2BQ9BVA1 445 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 VAV2P52735 878 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 SMTNP53814 917 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 AKNAD1Q5T1N1 836 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 PPP1R14CQ8TAE6 165 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 TSGA10Q9BZW7 698 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 IGSF3O75054 1194 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 KIF22Q14807 665 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 MAP7D1Q3KQU3 841 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 CNGA4Q8IV77 575 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 BAG1Q99933 345 aaPredicted RBP14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 LUC7L2Q9Y383 392 aaKnown RBP14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 HEG1Q9ULI3 1381 aa14.84□□□□□ -0.03
RAPGEF1-201ENST00000372189 ERVV-1B6SEH8 477 aa14.83□□□□□ -0.03
RAPGEF1-201ENST00000372189 UBXN1Q04323 297 aa14.83□□□□□ -0.03
RAPGEF1-201ENST00000372189 PABPC4Q13310 644 aaKnown RBP eCLIP14.83□□□□□ -0.032e-7■■■■■ 32.7
RAPGEF1-201ENST00000372189 WHAMMP3Q1A5X7 153 aa14.83□□□□□ -0.03
RAPGEF1-201ENST00000372189 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.03
RAPGEF1-201ENST00000372189 DPH6Q7L8W6 267 aa14.83□□□□□ -0.03
RAPGEF1-201ENST00000372189 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.03
RAPGEF1-201ENST00000372189 USP17L12C9JPN9 530 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 USP17L21D6R901 530 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 CFBP00751 764 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 ACTN2P35609 894 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 CCDC114Q96M63 670 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 MYL5Q02045 173 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 IFT74Q96LB3 600 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 CIAO1O76071 339 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 NONOQ15233 471 aaKnown RBP eCLIP14.83□□□□□ -0.049e-7■■■■□ 22.5
RAPGEF1-201ENST00000372189 GADL1Q6ZQY3 521 aa14.83□□□□□ -0.04
RAPGEF1-201ENST00000372189 RPL13P26373 211 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 MYL10Q9BUA6 226 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 CERKLQ49MI3 558 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 TSNARE1Q96NA8 513 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 PAGR1Q9BTK6 254 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 AKR1B15C9JRZ8 316 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 PDE8BO95263 885 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 TAF12Q16514 161 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 NCAPH2Q6IBW4 605 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 CPLX4Q7Z7G2 160 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 CCDC169A6NNP5 214 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 DDX39AO00148 427 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 SEMA3EO15041 775 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 ZEB2O60315 1214 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 STMN1P16949 149 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 DALRD3Q5D0E6 543 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 ZNF354CQ86Y25 554 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 NCOA5Q9HCD5 579 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 WDR70Q9NW82 654 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 CDK12Q9NYV4 1490 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 TNS3Q68CZ2 1445 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 U2AF2P26368 475 aaKnown RBP eCLIP14.82□□□□□ -0.041e-7■■■■■ 32.6
RAPGEF1-201ENST00000372189 ZNF365Q70YC5 407 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 TEX2Q8IWB9 1127 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 TTC16Q8NEE8 873 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 FRMD4BQ9Y2L6 1034 aa14.82□□□□□ -0.04
RAPGEF1-201ENST00000372189 ELP1O95163 1332 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 ZWINTO95229 277 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 PDE6AP16499 860 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 TXKP42681 527 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 SMC6Q96SB8 1091 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 IQCGQ9H095 443 aaKnown RBP14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 E7EWF7 191 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 IFNL3Q8IZI9 196 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 FERP16591 822 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 TNNC1P63316 161 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms