RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 YY1AP1Q9H869 796 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 KLF18A0A0U1RQI7 1052 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 PRC1O43663 620 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 CPLX2Q6PUV4 134 aaKnown RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 HOOK2Q96ED9 719 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 STRBPQ96SI9 672 aaKnown RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 RAVER2Q9HCJ3 691 aaKnown RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 FAM198AQ9UFP1 575 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 ZHX1Q9UKY1 873 aaPredicted RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 PTPRZ1P23471 2315 aaPredicted RBP8.18□□□□□ -1.1
USP1-202ENST00000371146 H3BQV1 296 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 MAFGO15525 162 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 SEC24BO95487 1268 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 IFFO2Q5TF58 517 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 CST9Q5W186 159 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 MTERF4Q7Z6M4 381 aaKnown RBP8.18□□□□□ -1.1
USP1-202ENST00000371146 FERMT3Q86UX7 667 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 TNS4Q8IZW8 715 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 NOC3LQ8WTT2 800 aaKnown RBP8.18□□□□□ -1.1
USP1-202ENST00000371146 CRYBG1Q9Y4K1 1723 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 TTC41PQ6P2S7 1318 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 USP17L5A8MUK1 530 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 ATN1P54259 1190 aaPredicted RBP8.18□□□□□ -1.1
USP1-202ENST00000371146 CATIPQ7Z7H3 387 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 RNF41Q9H4P4 317 aaPredicted RBP8.18□□□□□ -1.1
USP1-202ENST00000371146 SLX4Q8IY92 1834 aa8.18□□□□□ -1.1
USP1-202ENST00000371146 WDR33Q9C0J8 1336 aaKnown RBP8.18□□□□□ -1.1
USP1-202ENST00000371146 POTECB2RU33 542 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 SOX10P56693 466 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 SPDYE2Q495Y8 402 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 NCOA7Q8NI08 942 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 CEP95Q96GE4 821 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 ZDHHC15Q96MV8 337 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 C22orf23Q9BZE7 217 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 AS3MTQ9HBK9 375 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 SEC63Q9UGP8 760 aaKnown RBP8.17□□□□□ -1.1
USP1-202ENST00000371146 CYP46A1Q9Y6A2 500 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 PLEKHG2Q9H7P9 1386 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 GOLGA8AA7E2F4 631 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 DDX39AO00148 427 aaKnown RBP8.17□□□□□ -1.1
USP1-202ENST00000371146 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
USP1-202ENST00000371146 NOGQ13253 232 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 HHIPL2Q6UWX4 724 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 PI4K2BQ8TCG2 481 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 SLC26A6Q9BXS9 759 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 RTFDC1Q9BY42 306 aaPredicted RBP8.17□□□□□ -1.1
USP1-202ENST00000371146 MYO7AQ13402 2215 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 PDHXO00330 501 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 LIG1P18858 919 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 SNAPC2Q13487 334 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 DHX8Q14562 1220 aaKnown RBP8.17□□□□□ -1.1
USP1-202ENST00000371146 TTBK2Q6IQ55 1244 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 CTR9Q6PD62 1173 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 SAPCD2Q86UD0 394 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 NEK1Q96PY6 1258 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 RPAP3Q9H6T3 665 aaPredicted RBP8.17□□□□□ -1.1
USP1-202ENST00000371146 SAMM50Q9Y512 469 aa8.17□□□□□ -1.1
USP1-202ENST00000371146 GSG1L2A8MUP6 293 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 RBAK-RBAKDNI3L0D1 243 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 PGK2P07205 417 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 CREBRFQ8IUR6 639 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 CCDC83Q8IWF9 413 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 PHKBQ93100 1093 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 FERMT2Q96AC1 680 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 PGBD1Q96JS3 809 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 ESYT1Q9BSJ8 1104 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 GTPBP4Q9BZE4 634 aaKnown RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 BMP2KQ9NSY1 1161 aaPredicted RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 RTEL1Q9NZ71 1219 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 TOGARAM1Q9Y4F4 1720 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 UTYO14607 1347 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 LETM1O95202 739 aaPredicted RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 ELNP15502 786 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 ARID4AP29374 1257 aaPredicted RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 PSMC4P43686 418 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 TERF1P54274 439 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 ANAPC15P60006 121 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 FOXP4Q8IVH2 680 aaPredicted RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 ZNF280CQ8ND82 737 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 CCDC102AQ96A19 550 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 IL25Q9H293 177 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 GEMIN8Q9NWZ8 242 aaKnown RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 TAF6LQ9Y6J9 622 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 ANKRD26Q9UPS8 1709 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 GPR75-ASB3A0A0A6YYF3 556 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 GOLGA6L3A6NEY3 463 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 TRIM29Q14134 588 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 AKNAD1Q5T1N1 836 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 Q6ZUG5 572 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 CD99L2Q8TCZ2 262 aa8.16□□□□□ -1.1
USP1-202ENST00000371146 DHX36Q9H2U1 1008 aaKnown RBP8.16□□□□□ -1.1
USP1-202ENST00000371146 F5H6K3 240 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 USP2O75604 605 aaPredicted RBP8.15□□□□□ -1.1
USP1-202ENST00000371146 KLRC3Q07444 240 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms