RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 DBN1Q16643 649 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 PALM2Q8IXS6 379 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 KLHL30Q0D2K2 578 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 ZSCAN26Q16670 478 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 NCAPH2Q6IBW4 605 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 SH2D4AQ9H788 454 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
HCFC1-202ENST00000369984 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 BAG2O95816 211 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 SH3BGRP55822 239 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-202ENST00000369984 Q9H521 79 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 PICK1Q9NRD5 415 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
HCFC1-202ENST00000369984 SAR1BQ9Y6B6 198 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 WDR7Q9Y4E6 1490 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 ANKRD42Q8N9B4 389 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 ZBTB24O43167 697 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-202ENST00000369984 KLHL14Q9P2G3 628 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
HCFC1-202ENST00000369984 TTC38Q5R3I4 469 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 BSPRYQ5W0U4 402 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 SLF1Q9BQI6 1058 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 EFCC1Q9HA90 598 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 POLKQ9UBT6 870 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 KRT3P12035 628 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 RAD51AP2Q09MP3 1159 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 RBBP5Q15291 538 aaKnown RBP13.74□□□□□ -0.21
HCFC1-202ENST00000369984 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 SND1Q7KZF4 910 aaKnown RBP eCLIP13.74□□□□□ -0.21
HCFC1-202ENST00000369984 C2CD5Q86YS7 1000 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 AMFRQ9UKV5 643 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 MAP3K5Q99683 1374 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
HCFC1-202ENST00000369984 NCOA5Q9HCD5 579 aaKnown RBP13.74□□□□□ -0.21
HCFC1-202ENST00000369984 TAB2Q9NYJ8 693 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 MAIP1Q8WWC4 291 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 KRT19P08727 400 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 MRFAP1L1Q96HT8 127 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
HCFC1-202ENST00000369984 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 NUCKS1Q9H1E3 243 aaKnown RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 HIP1RO75146 1068 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 KRT81Q14533 505 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 PRPF6O94906 941 aaKnown RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 SEC24BO95487 1268 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 RRAGAQ7L523 313 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 GLT8D2Q9H1C3 349 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 MYCLP12524 364 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 PHLDB3Q6NSJ2 640 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 PPME1Q9Y570 386 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 KDM2BQ8NHM5 1336 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 ADKP55263 362 aaKnown RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 USH1GQ495M9 461 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 LINS1Q8NG48 757 aa13.73□□□□□ -0.21
HCFC1-202ENST00000369984 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-202ENST00000369984 GNA14O95837 355 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 SYF2O95926 243 aaKnown RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 POLD1P28340 1107 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 SERPINB6P35237 376 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 MAGEA1P43355 309 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 DYMQ7RTS9 669 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 PHKBQ93100 1093 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 RPGRIP1Q96KN7 1286 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 CCDC84Q86UT8 332 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 V9GY48 417 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 DNAJC8O75937 253 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 ATP1A2P50993 1020 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 CTAGE3PQ8IX95 158 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 TRIM58Q8NG06 486 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 TMOD4Q9NZQ9 345 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 KIF1BO60333 1816 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 FAM170AA1A519 330 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 LUC7L3O95232 432 aaKnown RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 SNX29Q8TEQ0 813 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 KRIT1O00522 736 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms