RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 GRXCR2A6NFK2 248 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 KIF5CO60282 957 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 CELF2O95319 508 aaKnown RBP5.86□□□□□ -1.47
UBE3D-202ENST00000369746 OATP04181 439 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 CYP2C19P33261 490 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 SOX10P56693 466 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 CABP4P57796 275 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 OTUD7BQ6GQQ9 843 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF467Q7Z7K2 595 aaPredicted RBP5.86□□□□□ -1.47
UBE3D-202ENST00000369746 NIM1KQ8IY84 436 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 KRT222Q8N1A0 295 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 CNBD1Q8NA66 436 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 MPP4Q96JB8 637 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF333Q96JL9 665 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 SIN3AQ96ST3 1273 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 TMEM106CQ9BVX2 250 aa5.86□□□□□ -1.47
UBE3D-202ENST00000369746 ECM29Q5VYK3 1845 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 A0A1B0GUL7 405 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 ZBTB7BO15156 539 aaPredicted RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 PIK3CAP42336 1068 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 BRD3Q15059 726 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SLFNL1Q499Z3 407 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SLC10A5Q5PT55 438 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 LCA5Q86VQ0 697 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 TRIML1Q8N9V2 468 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SNX21Q969T3 373 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF496Q96IT1 587 aaPredicted RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 CDHR1Q96JP9 859 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 CSRNP1Q96S65 589 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 LARP6Q9BRS8 491 aaKnown RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 XPO4Q9C0E2 1151 aaKnown RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 DNAJC25Q9H1X3 360 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 DEF6Q9H4E7 631 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SPTLC3Q9NUV7 552 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 CWC15Q9P013 229 aaKnown RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 BIN2Q9UBW5 565 aaPredicted RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 TBK1Q9UHD2 729 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 POLG2Q9UHN1 485 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SPDYE2BA6NHP3 402 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SPDYE5A6NIY4 337 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 INMTO95050 263 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SPDYE6P0CI01 402 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 TRAPPC10P48553 1259 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF280AP59817 542 aaPredicted RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 SPDYE2Q495Y8 402 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 JAKMIP3Q5VZ66 844 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 USPL1Q5W0Q7 1092 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 NUTM1Q86Y26 1132 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 LSM14AQ8ND56 463 aaKnown RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 GOLGA1Q92805 767 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 FAM122AQ96E09 287 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 C8orf48Q96LL4 319 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 FAM126AQ9BYI3 521 aaPredicted RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 RWDD1Q9H446 243 aaPredicted RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 ENAMQ9NRM1 1142 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 MRPS23Q9Y3D9 190 aaKnown RBP5.85□□□□□ -1.47
UBE3D-202ENST00000369746 JRKLQ9Y4A0 524 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 MYPNQ86TC9 1320 aa5.85□□□□□ -1.47
UBE3D-202ENST00000369746 C21orf2O43822 256 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 TPPPO94811 219 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 FECHP22830 423 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 HOXC13P31276 330 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 TSPAN7P41732 249 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 SLC4A3P48751 1232 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 SLC7A5Q01650 507 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 AMHR2Q16671 573 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 INO80DQ53TQ3 878 aaPredicted RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 BICDL1Q6ZP65 573 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 TAS1R3Q7RTX0 852 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 CATIPQ7Z7H3 387 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 TXLNBQ8N3L3 684 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 ARL10Q8N8L6 244 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 MTMR14Q8NCE2 650 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 GBP4Q96PP9 640 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF219Q9P2Y4 722 aaPredicted RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 CTNNA3Q9UI47 895 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 HEG1Q9ULI3 1381 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 H7C1D1 291 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 HTATSF1O43719 755 aaKnown RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 DNAJC6O75061 913 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 AOC2O75106 756 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 VIL1P09327 827 aaKnown RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 NDUFV2P19404 249 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 ENPP1P22413 925 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 HSD3B2P26439 372 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 GJC2Q5T442 439 aaPredicted RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 TPTE2Q6XPS3 522 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 MCM10Q7L590 875 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 FERMT3Q86UX7 667 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 STAG2Q8N3U4 1231 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 PRKRIP1Q9H875 184 aaPredicted RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 KANSL2Q9H9L4 492 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 SLC52A2Q9HAB3 445 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 ODF2LQ9ULJ1 636 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 MAFFQ9ULX9 164 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 COLQQ9Y215 455 aaPredicted RBP5.84□□□□□ -1.47
UBE3D-202ENST00000369746 RABGAP1Q9Y3P9 1069 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 N6AMT1Q9Y5N5 214 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms