RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 KIF22Q14807 665 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 SEPT2Q15019 361 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 USP17L2Q6R6M4 530 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 SIAH1Q8IUQ4 282 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 PLEKHM2Q8IWE5 1019 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 EVI5LQ96CN4 794 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 FSD1Q9BTV5 496 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 CABP5Q9NP86 173 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 TMOD4Q9NZQ9 345 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 ARPP21Q9UBL0 812 aaPredicted RBP24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 PTCH2Q9Y6C5 1203 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 ROBO3Q96MS0 1386 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 GNAT2P19087 354 aa24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 PRMT2P55345 433 aa24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 RAB3GAP1Q15042 981 aa24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 FAM110CQ1W6H9 321 aa24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 HABP4Q5JVS0 413 aaKnown RBP24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 B4GALNT3Q6L9W6 998 aa24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 POTEEQ6S8J3 1075 aa24.64■■□□□ 1.54
SMNDC1-201ENST00000369592 A0A1W2PRG0 241 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 FOXP2O15409 715 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 AKR1B1P15121 316 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 OSBPP22059 807 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 GCLCP48506 637 aaPredicted RBP24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 TMEM179Q6ZVK1 233 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 SMCR8Q8TEV9 937 aaPredicted RBP24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 DDRGK1Q96HY6 314 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 CCDC17Q96LX7 622 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 SRRDQ9UH36 339 aa24.63■■□□□ 1.53
SMNDC1-201ENST00000369592 RBBP6Q7Z6E9 1792 aaKnown RBP24.62■■□□□ 1.53
SMNDC1-201ENST00000369592 PATL2C9JE40 543 aaKnown RBP24.62■■□□□ 1.53
SMNDC1-201ENST00000369592 P2RX7Q99572 595 aaKnown RBP24.62■■□□□ 1.53
SMNDC1-201ENST00000369592 MORF4L1Q9UBU8 362 aa24.62■■□□□ 1.53
SMNDC1-201ENST00000369592 RLFQ13129 1914 aa24.61■■□□□ 1.53
SMNDC1-201ENST00000369592 ANKRD13CQ8N6S4 541 aa24.61■■□□□ 1.53
SMNDC1-201ENST00000369592 USP14P54578 494 aa24.6■■□□□ 1.53
SMNDC1-201ENST00000369592 FCGRTP55899 365 aa24.6■■□□□ 1.53
SMNDC1-201ENST00000369592 IRX6P78412 446 aaPredicted RBP24.6■■□□□ 1.53
SMNDC1-201ENST00000369592 AMOTL1Q8IY63 956 aa24.6■■□□□ 1.53
SMNDC1-201ENST00000369592 IFNL3Q8IZI9 196 aa24.6■■□□□ 1.53
SMNDC1-201ENST00000369592 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.6■■□□□ 1.53
SMNDC1-201ENST00000369592 HERVK_113P62684 666 aa24.59■■□□□ 1.53
SMNDC1-201ENST00000369592 ZNF333Q96JL9 665 aa24.59■■□□□ 1.53
SMNDC1-201ENST00000369592 FMNL1O95466 1100 aaPredicted RBP24.58■■□□□ 1.53
SMNDC1-201ENST00000369592 VCAM1P19320 739 aa24.58■■□□□ 1.53
SMNDC1-201ENST00000369592 RASA1P20936 1047 aa24.58■■□□□ 1.53
SMNDC1-201ENST00000369592 CATSPERGQ6ZRH7 1159 aa24.58■■□□□ 1.53
SMNDC1-201ENST00000369592 TXNRD2Q9NNW7 524 aa24.58■■□□□ 1.53
SMNDC1-201ENST00000369592 RBPJLQ9UBG7 517 aa24.58■■□□□ 1.53
SMNDC1-201ENST00000369592 PLXNB2O15031 1838 aa24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 MPHOSPH10O00566 681 aaKnown RBP24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 HOXD10P28358 340 aa24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 IRX3P78415 501 aaPredicted RBP24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 KIAA1755Q5JYT7 1200 aa24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 FEZ1Q99689 392 aa24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 HELLSQ9NRZ9 838 aa24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 TMX2Q9Y320 296 aa24.57■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L15C9J2P7 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L13C9JLJ4 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L11C9JVI0 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L18D6R9N7 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L22D6RA61 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L17D6RBQ6 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L19D6RCP7 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L20D6RJB6 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 PRKCZQ05513 592 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 USP17L24Q0WX57 530 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 ZYXQ15942 572 aaKnown RBP24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 LBX2Q6XYB7 198 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 CCDC129Q6ZRS4 1044 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 CLEC10AQ8IUN9 316 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 GABRQQ9UN88 632 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 BRCA2P51587 3418 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 MYPNQ86TC9 1320 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 PARP14Q460N5 1801 aa24.56■■□□□ 1.52
SMNDC1-201ENST00000369592 ECM2O94769 699 aaPredicted RBP24.55■■□□□ 1.52
SMNDC1-201ENST00000369592 PDE4AP27815 886 aa24.55■■□□□ 1.52
SMNDC1-201ENST00000369592 FAM227BQ96M60 508 aa24.55■■□□□ 1.52
SMNDC1-201ENST00000369592 IGKV6D-41A0A0C4DH26 115 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 A0A0D9SFI3 127 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 MINDY4BA8MYZ0 360 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 PEX10O60683 326 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 CNMDO75829 334 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 TDO2P48775 406 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 ICA1Q05084 483 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 IRF5Q13568 498 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 SLC9C1Q4G0N8 1177 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 GTF3C2Q8WUA4 911 aaPredicted RBP24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 KANSL2Q9H9L4 492 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 GJD2Q9UKL4 321 aa24.54■■□□□ 1.52
SMNDC1-201ENST00000369592 APPP05067 770 aa24.53■■□□□ 1.52
SMNDC1-201ENST00000369592 ALX1Q15699 326 aa24.53■■□□□ 1.52
SMNDC1-201ENST00000369592 Q3C1V9 767 aa24.53■■□□□ 1.52
SMNDC1-201ENST00000369592 VPS53Q5VIR6 699 aa24.53■■□□□ 1.52
SMNDC1-201ENST00000369592 NACAP1Q9BZK3 213 aa24.53■■□□□ 1.52
SMNDC1-201ENST00000369592 A0A0G2JMZ2 1700 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 TNPO2O14787 897 aaKnown RBP24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 EEF2P13639 858 aaKnown RBP24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 FLT3LGP49771 235 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 MCMDC2Q4G0Z9 681 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms