RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 SERPINB13Q9UIV8 391 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 MYO3BQ8WXR4 1341 aa16.42■□□□□ 0.22
HMGCS2-201ENST00000369406 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
HMGCS2-201ENST00000369406 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
HMGCS2-201ENST00000369406 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
HMGCS2-201ENST00000369406 SRBD1Q8N5C6 995 aaKnown RBP16.42■□□□□ 0.22
HMGCS2-201ENST00000369406 STK36Q9NRP7 1315 aa16.42■□□□□ 0.22
HMGCS2-201ENST00000369406 GOLGA6L22H0YM25 854 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 DDAH1O94760 285 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 VEGFAP15692 232 aaPredicted RBP16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 DGKHQ86XP1 1220 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 STAG2Q8N3U4 1231 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 TMEM87AQ8NBN3 555 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 PNMA1Q8ND90 353 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 ZNF541Q9H0D2 1346 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 PLIN4Q96Q06 1357 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 PKN1Q16512 942 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 ZBED3Q96IU2 234 aaPredicted RBP16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 CNTNAP5Q8WYK1 1306 aa16.41■□□□□ 0.22
HMGCS2-201ENST00000369406 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 CDKL5O76039 1030 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 JAG1P78504 1218 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 KRT40Q6A162 431 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 ZNF70Q9UC06 446 aaPredicted RBP16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 NOVP48745 357 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 NBPF9Q3BBW0 867 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 AGBL3Q8NEM8 1001 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 JDP2Q8WYK2 163 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 ATRNL1Q5VV63 1379 aa16.4■□□□□ 0.22
HMGCS2-201ENST00000369406 EHD4Q9H223 541 aa16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 MAD2L2Q9UI95 211 aa16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 KCNJ14Q9UNX9 436 aa16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 KIF23Q02241 960 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 KLHL40Q2TBA0 621 aa16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 ASTN2O75129 1339 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-201ENST00000369406 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 GOLGA8HP0CJ92 632 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 FZD9O00144 591 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 ADAMTS3O15072 1205 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 CEBPZQ03701 1054 aaKnown RBP16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 GRM4Q14833 912 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 ZSCAN29Q8IWY8 852 aaPredicted RBP16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 ZNF287Q9HBT7 754 aa16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
HMGCS2-201ENST00000369406 WNT10BO00744 389 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 GMPSP49915 693 aaPredicted RBP16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 CYTH3O43739 400 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 ENTPD3O75355 529 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 CALM1P0DP23 149 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 CALM2P0DP24 149 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 CALM3P0DP25 149 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 OGFOD1Q8N543 542 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 ZSCAN16Q9H4T2 348 aaPredicted RBP16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 MYOZ2Q9NPC6 264 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 SWAP70Q9UH65 585 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 HDAC9Q9UKV0 1011 aa16.37■□□□□ 0.21
HMGCS2-201ENST00000369406 POLR2AP24928 1970 aaKnown RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 KRT85P78386 507 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 CAVIN1Q6NZI2 390 aaKnown RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 METTL16Q86W50 562 aaKnown RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 OXER1Q8TDS5 423 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 RNF26Q9BY78 433 aaPredicted RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 VPS54Q9P1Q0 977 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 GJA3Q9Y6H8 435 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms