RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCNM1-202ENST00000368905 FILIP1LQ4L180 1135 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 PPP1R42Q7Z4L9 355 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 RMDN2Q96LZ7 410 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 ALG2Q9H553 416 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 PCSK1NQ9UHG2 260 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 GTF3C4Q9UKN8 822 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 PXDNQ92626 1479 aa11.39□□□□□ -0.59
SCNM1-202ENST00000368905 SLC27A2O14975 620 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 GLULP15104 373 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 EPB42P16452 691 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 EPHB1P54762 984 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 UBASH3AP57075 661 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SKOR2Q2VWA4 1001 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 AXIN2Q9Y2T1 843 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SIPA1L3O60292 1781 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 KCNQ3O43525 872 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SNX2O60749 519 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SARSP49591 514 aaKnown RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 NUCB2P80303 420 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SARNPP82979 210 aaKnown RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 MTX1Q13505 466 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 SERINC3Q13530 473 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 TTLL5Q6EMB2 1281 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 METTL3Q86U44 580 aaKnown RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 MYOCDQ8IZQ8 938 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 UIMC1Q96RL1 719 aa11.38□□□□□ -0.59
SCNM1-202ENST00000368905 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCNM1-202ENST00000368905 TNS3Q68CZ2 1445 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 H0YHG0 523 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 FOXN3O00409 490 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-202ENST00000368905 RHOBTB3O94955 611 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 MMEP08473 750 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 FGRP09769 529 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 VAC14Q08AM6 782 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 NKAIN3Q8N8D7 197 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 IPCEF1Q8WWN9 437 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-202ENST00000368905 UROC1Q96N76 676 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
SCNM1-202ENST00000368905 CEP131Q9UPN4 1083 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 ADCY9O60503 1353 aa11.37□□□□□ -0.59
SCNM1-202ENST00000368905 AHDC1Q5TGY3 1603 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-202ENST00000368905 SOCS7O14512 581 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 ZNF76P36508 570 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 MASP1P48740 699 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 SLC7A5Q01650 507 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
SCNM1-202ENST00000368905 RHPN1Q8TCX5 695 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
SCNM1-202ENST00000368905 MAP3K2Q9Y2U5 619 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 SMARCA1P28370 1054 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 PDE1CQ14123 709 aaPredicted RBP11.36□□□□□ -0.59
SCNM1-202ENST00000368905 WTAPQ15007 396 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 ZC3H12BQ5HYM0 836 aaKnown RBP11.36□□□□□ -0.59
SCNM1-202ENST00000368905 CDCA2Q69YH5 1023 aaPredicted RBP11.36□□□□□ -0.59
SCNM1-202ENST00000368905 TEX9Q8N6V9 391 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 LINS1Q8NG48 757 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
SCNM1-202ENST00000368905 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 ANO2Q9NQ90 1003 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 PHLPP1O60346 1717 aa11.36□□□□□ -0.59
SCNM1-202ENST00000368905 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 SGTAO43765 313 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 PIP5K1CO60331 668 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 IFIT2P09913 472 aaKnown RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 ZSCAN20P17040 1043 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 ATF7P17544 494 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 CHMLP26374 656 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 MUM1Q2TAK8 710 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 SLC10A5Q5PT55 438 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 SYNE3Q6ZMZ3 975 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 MMS22LQ6ZRQ5 1243 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 MAATS1Q7Z4T9 603 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 JPH3Q8WXH2 748 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 DCAF5Q96JK2 942 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 AP1M1Q9BXS5 423 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 EPB41L4AQ9HCS5 686 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 BRMS1Q9HCU9 246 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms