RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SMCR8Q8TEV9 937 aaPredicted RBP20.15■□□□□ 0.82
SNX27-202ENST00000368841 BUB1O43683 1085 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 SH2D4BQ5SQS7 431 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 NXNQ6DKJ4 435 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 CEP120Q8N960 986 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 CLGNO14967 610 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 VPS41P49754 854 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 ARHGEF16Q5VV41 709 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 LRRC47Q8N1G4 583 aaKnown RBP20.15■□□□□ 0.82
SNX27-202ENST00000368841 CSRNP2Q9H175 543 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 TRPC6Q9Y210 931 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 RILPQ96NA2 401 aa20.15■□□□□ 0.82
SNX27-202ENST00000368841 RRAGAQ7L523 313 aa20.14■□□□□ 0.82
SNX27-202ENST00000368841 RIOK1Q9BRS2 568 aaKnown RBP20.14■□□□□ 0.82
SNX27-202ENST00000368841 CARD10Q9BWT7 1032 aa20.14■□□□□ 0.82
SNX27-202ENST00000368841 APOL6Q9BWW8 343 aa20.14■□□□□ 0.82
SNX27-202ENST00000368841 EYA2O00167 538 aa20.14■□□□□ 0.82
SNX27-202ENST00000368841 ZNF202O95125 648 aa20.14■□□□□ 0.82
SNX27-202ENST00000368841 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.82
SNX27-202ENST00000368841 METTL22Q9BUU2 404 aaPredicted RBP20.14■□□□□ 0.82
SNX27-202ENST00000368841 BZW2Q9Y6E2 419 aaKnown RBP20.14■□□□□ 0.82
SNX27-202ENST00000368841 CETN3O15182 167 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 KRT15P19012 456 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 ATP5DP30049 168 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 TECP42680 631 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 CDAN1Q8IWY9 1227 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 UHMK1Q8TAS1 419 aaKnown RBP20.14■□□□□ 0.81
SNX27-202ENST00000368841 GLG1Q92896 1179 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 RIOK3O14730 519 aaKnown RBP20.14■□□□□ 0.81
SNX27-202ENST00000368841 KAZNQ674X7 775 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
SNX27-202ENST00000368841 GTF2IP78347 998 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 PPP2R5AQ15172 486 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 PPME1Q9Y570 386 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 GOLGA6CA6NDK9 693 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 GOLGA6DP0CG33 693 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 YARSP54577 528 aaKnown RBP20.14■□□□□ 0.81
SNX27-202ENST00000368841 GOLGA6AQ9NYA3 693 aa20.14■□□□□ 0.81
SNX27-202ENST00000368841 CUL7Q14999 1698 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 APBA3O96018 575 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 IRX3P78415 501 aaPredicted RBP20.13■□□□□ 0.81
SNX27-202ENST00000368841 POSTNQ15063 836 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 U2AF1L4Q8WU68 220 aaKnown RBP20.13■□□□□ 0.81
SNX27-202ENST00000368841 FAM184BQ9ULE4 1060 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 ANGEL1Q9UNK9 670 aaKnown RBP20.13■□□□□ 0.81
SNX27-202ENST00000368841 KRT81Q14533 505 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
SNX27-202ENST00000368841 CCDC94Q9BW85 323 aaPredicted RBP20.13■□□□□ 0.81
SNX27-202ENST00000368841 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 PPP1R12AO14974 1030 aaPredicted RBP20.13■□□□□ 0.81
SNX27-202ENST00000368841 NSMCE1Q8WV22 266 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 MCUR1Q96AQ8 359 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 PPFIBP2Q8ND30 876 aa20.13■□□□□ 0.81
SNX27-202ENST00000368841 RPRD2Q5VT52 1461 aaKnown RBP20.12■□□□□ 0.81
SNX27-202ENST00000368841 PNMA6EA0A0J9YXQ4 647 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 TFAP4Q01664 338 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 KLHL30Q0D2K2 578 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 SEPT6Q14141 434 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 PPIP5K2O43314 1243 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 LONRF2Q1L5Z9 754 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 SDR42E1Q8WUS8 393 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 NAP1L4Q99733 375 aaKnown RBP20.12■□□□□ 0.81
SNX27-202ENST00000368841 ZBTB40Q9NUA8 1239 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 BCS1LQ9Y276 419 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 USP19O94966 1318 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 BRDTQ58F21 947 aaPredicted RBP20.12■□□□□ 0.81
SNX27-202ENST00000368841 ARID4AP29374 1257 aaPredicted RBP20.12■□□□□ 0.81
SNX27-202ENST00000368841 CCDC125Q86Z20 511 aa20.12■□□□□ 0.81
SNX27-202ENST00000368841 RSRC1Q96IZ7 334 aaKnown RBP20.12■□□□□ 0.81
SNX27-202ENST00000368841 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
SNX27-202ENST00000368841 GPKOWQ92917 476 aaPredicted RBP eCLIP20.12■□□□□ 0.81
SNX27-202ENST00000368841 GBP6Q6ZN66 633 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 MIPOL1Q8TD10 442 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 SERTAD1Q9UHV2 236 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 VWA3BQ502W6 1294 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 NDUFAB1O14561 156 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 ACTN4O43707 911 aaKnown RBP20.11■□□□□ 0.81
SNX27-202ENST00000368841 NLRP12P59046 1061 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 FOXD4Q12950 439 aaPredicted RBP20.11■□□□□ 0.81
SNX27-202ENST00000368841 NONOQ15233 471 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNX27-202ENST00000368841 PTPN21Q16825 1174 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 RILPL1Q5EBL4 403 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 SFMBT2Q5VUG0 894 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 SYCP2Q9BX26 1530 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 DNM2P50570 870 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 UBXN2AP68543 259 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 CTAGE3PQ8IX95 158 aa20.11■□□□□ 0.81
SNX27-202ENST00000368841 SKA2Q8WVK7 121 aaPredicted RBP20.11■□□□□ 0.81
SNX27-202ENST00000368841 LPXNO60711 386 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 SLC9C1Q4G0N8 1177 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 PRR16Q569H4 304 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 KDRP35968 1356 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 SLC4A1P02730 911 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 CLCN1P35523 988 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 Q3C1V9 767 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 TACO1Q9BSH4 297 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms