RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 KIAA1683Q9H0B3 1180 aa17.93■□□□□ 0.46
CTSD-202ENST00000367196 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.93■□□□□ 0.465e-7■■■■■ 28.2
CTSD-202ENST00000367196 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
CTSD-202ENST00000367196 MYH8P13535 1937 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 H0YGN5 161 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 XRCC5P13010 732 aaKnown RBP17.92■□□□□ 0.46
CTSD-202ENST00000367196 ATP5JP18859 108 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 DDRGK1Q96HY6 314 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 PAGR1Q9BTK6 254 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 HMX1Q9NP08 348 aaPredicted RBP17.92■□□□□ 0.46
CTSD-202ENST00000367196 SWAP70Q9UH65 585 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 GJD2Q9UKL4 321 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 NR2E3Q9Y5X4 410 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 MYH7P12883 1935 aa17.92■□□□□ 0.46
CTSD-202ENST00000367196 GLRX3O76003 335 aaKnown RBP17.91■□□□□ 0.46
CTSD-202ENST00000367196 SHMT1P34896 483 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 PLCD1P51178 756 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
CTSD-202ENST00000367196 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 ANKLE1Q8NAG6 615 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 TXNRD2Q9NNW7 524 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 ATP8A2Q9NTI2 1148 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 PLXNB2O15031 1838 aa17.91■□□□□ 0.46
CTSD-202ENST00000367196 TCRBV5S4A2TA0A5A2 114 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 GABPAQ06546 454 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 LCORLQ8N3X6 602 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 HAUS7Q99871 368 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 CRISPLD2Q9H0B8 497 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 BOLA2Q9H3K6 86 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 DCP1AQ9NPI6 582 aaPredicted RBP17.9■□□□□ 0.46
CTSD-202ENST00000367196 RBPJLQ9UBG7 517 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
CTSD-202ENST00000367196 MPHOSPH10O00566 681 aaKnown RBP17.89■□□□□ 0.45
CTSD-202ENST00000367196 ZKSCAN1P17029 563 aaPredicted RBP17.89■□□□□ 0.45
CTSD-202ENST00000367196 VCAM1P19320 739 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 CYP2B6P20813 491 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 ADD2P35612 726 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 RGS2P41220 211 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 CATSPERGQ6ZRH7 1159 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 PLEKHH3Q7Z736 793 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 SDR42E1Q8WUS8 393 aa17.89■□□□□ 0.45
CTSD-202ENST00000367196 MBD4O95243 580 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 TMEM179Q6ZVK1 233 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 GPR142Q7Z601 462 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 NECAB2Q7Z6G3 386 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 TRIB2Q92519 343 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 GPATCH3Q96I76 525 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 APBA2Q99767 749 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 SH2D4AQ9H788 454 aa17.88■□□□□ 0.45
CTSD-202ENST00000367196 COLQQ9Y215 455 aaPredicted RBP17.88■□□□□ 0.45
CTSD-202ENST00000367196 EVI5O60447 810 aa17.87■□□□□ 0.45
CTSD-202ENST00000367196 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
CTSD-202ENST00000367196 UBE3CQ15386 1083 aa17.87■□□□□ 0.45
CTSD-202ENST00000367196 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
CTSD-202ENST00000367196 EDC3Q96F86 508 aaKnown RBP17.87■□□□□ 0.45
CTSD-202ENST00000367196 PORCNQ9H237 461 aa17.87■□□□□ 0.45
CTSD-202ENST00000367196 ARMT1Q9H993 441 aa17.87■□□□□ 0.45
CTSD-202ENST00000367196 IVNS1ABPQ9Y6Y0 642 aa17.87■□□□□ 0.45
CTSD-202ENST00000367196 SEPT2Q15019 361 aa17.86■□□□□ 0.45
CTSD-202ENST00000367196 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
CTSD-202ENST00000367196 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
CTSD-202ENST00000367196 ARHGEF10LQ9HCE6 1279 aa17.86■□□□□ 0.45
CTSD-202ENST00000367196 BAZ2AQ9UIF9 1905 aaKnown RBP17.86■□□□□ 0.45
CTSD-202ENST00000367196 GUCY1A2P33402 732 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 MAP2K5Q13163 448 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 Q3C1V9 767 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 MORN1Q5T089 497 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 MAP3K21Q5TCX8 1036 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 WDR78Q5VTH9 848 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 LPAR1Q92633 364 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 PAWRQ96IZ0 340 aaKnown RBP17.85■□□□□ 0.45
CTSD-202ENST00000367196 CCDC17Q96LX7 622 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 ECHDC1Q9NTX5 307 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 HOXC10Q9NYD6 342 aa17.85■□□□□ 0.45
CTSD-202ENST00000367196 TRIOBPQ9H2D6 2365 aa17.84■□□□□ 0.45
CTSD-202ENST00000367196 SLC15A5A6NIM6 579 aa17.84■□□□□ 0.45
CTSD-202ENST00000367196 PEX10O60683 326 aa17.84■□□□□ 0.45
CTSD-202ENST00000367196 FXR1P51114 621 aaKnown RBP eCLIP17.84■□□□□ 0.45
CTSD-202ENST00000367196 USP6NLQ92738 828 aa17.84■□□□□ 0.45
CTSD-202ENST00000367196 TANGO6Q9C0B7 1094 aa17.84■□□□□ 0.45
CTSD-202ENST00000367196 NBPF3Q9H094 633 aa17.84■□□□□ 0.45
CTSD-202ENST00000367196 SPDYE16A6NNV3 312 aaPredicted RBP17.83■□□□□ 0.44
CTSD-202ENST00000367196 CNMDO75829 334 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 ICA1Q05084 483 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 TRIM32Q13049 653 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 COG2Q14746 738 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 C20orf194Q5TEA3 1177 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 C12orf60Q5U649 245 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 MFSD14CQ5VZR4 134 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 MB21D1Q8N884 522 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 ARPP21Q9UBL0 812 aaPredicted RBP17.83■□□□□ 0.44
CTSD-202ENST00000367196 OGDHLQ9ULD0 1010 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.44
CTSD-202ENST00000367196 CYP2D6P10635 497 aa17.82■□□□□ 0.44
CTSD-202ENST00000367196 LRRFIP1Q32MZ4 808 aaKnown RBP17.82■□□□□ 0.44
CTSD-202ENST00000367196 ZNF236Q9UL36 1845 aa17.82■□□□□ 0.44
CTSD-202ENST00000367196 A0A0G2JMZ2 1700 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms