RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 XKR9Q5GH70 373 aa11.78□□□□□ -0.52
CACNA1S-201ENST00000362061 CABP7Q86V35 215 aa11.78□□□□□ -0.52
CACNA1S-201ENST00000362061 VPS54Q9P1Q0 977 aa11.78□□□□□ -0.52
CACNA1S-201ENST00000362061 STIM2Q9P246 746 aa11.78□□□□□ -0.52
CACNA1S-201ENST00000362061 CTAGE9A4FU28 777 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 CALCOCO2Q13137 446 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 RSPH3Q86UC2 560 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 CSRNP2Q9H175 543 aa11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.52
CACNA1S-201ENST00000362061 MMP10P09238 476 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 ATP5JP18859 108 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 LLPHQ9BRT6 129 aaKnown RBP11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 CGNQ9P2M7 1197 aaKnown RBP11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 AFF2P51816 1311 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 MCTP2Q6DN12 878 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 GSDMBQ8TAX9 411 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 CAPZA3Q96KX2 299 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 KIF21AQ7Z4S6 1674 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 SEMA3EO15041 775 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 POLR2DO15514 142 aaKnown RBP11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 ZEB2O60315 1214 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 ERCC5P28715 1186 aaPredicted RBP11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 USP26Q9BXU7 913 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 NRBP2Q9NSY0 501 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 TTLL3Q9Y4R7 772 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 IFNL3Q8IZI9 196 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 CCT6BQ92526 530 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 NT5C3AQ9H0P0 336 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.53
CACNA1S-201ENST00000362061 AOX1Q06278 1338 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 INSRP06213 1382 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 PDE6AP16499 860 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 PSMC4P43686 418 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 GEN1Q17RS7 908 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 FAM160B1Q5W0V3 765 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 ZNF654Q8IZM8 581 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 DDX23Q9BUQ8 820 aaKnown RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 STMN4Q9H169 189 aaPredicted RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 YWHAEP62258 255 aaKnown RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 PNMA1Q8ND90 353 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 JAKMIP2Q96AA8 810 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 VPS16Q9H269 839 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 IFNKQ9P0W0 207 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 MTRF1LQ9UGC7 380 aaKnown RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 CSPG5O95196 566 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 LRRC24Q50LG9 513 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 GABPB2Q8TAK5 448 aaPredicted RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 INTS4Q96HW7 963 aaKnown RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 THRAP3Q9Y2W1 955 aaKnown RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 KDRP35968 1356 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 CRCPO75575 148 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 ATF7P17544 494 aaPredicted RBP11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 LIG4P49917 911 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 PPP2R5DQ14738 602 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 Q3C1V9 767 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 KRT40Q6A162 431 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 FBF1Q8TES7 1133 aa11.76□□□□□ -0.53
CACNA1S-201ENST00000362061 MYL5Q02045 173 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 POLA2Q14181 598 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 ASIC2Q16515 512 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 RPS6KC1Q96S38 1066 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 LZTFL1Q9NQ48 299 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 KLRF2D3W0D1 207 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 CNGA4Q8IV77 575 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 C2orf69Q8N8R5 385 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 SMC1BQ8NDV3 1235 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 USTQ9Y2C2 406 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 FAM160A1Q05DH4 1040 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 SNX21Q969T3 373 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 MMS19Q96T76 1030 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 DSCC1Q9BVC3 393 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 E7EWF7 191 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 CUTAO60888 179 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 NPR1P16066 1061 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 ERCC3P19447 782 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 TEKT3Q9BXF9 490 aa11.75□□□□□ -0.53
CACNA1S-201ENST00000362061 SNX14Q9Y5W7 946 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms