RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SH2D3CQ8N5H7 860 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 HPCAL4Q9UM19 191 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 MACROD2A1Z1Q3 448 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 BTBD18B2RXH4 712 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 SCARF1Q14162 830 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 LDHAL6AQ6ZMR3 332 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 BRINP3Q76B58 766 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 MMS19Q96T76 1030 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
VAMP1-201ENST00000361716 MAN1B1Q9UKM7 699 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 ZBTB43O43298 467 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 XAGE2Q96GT9 111 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 SLC12A7Q9Y666 1083 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 BMP6P22004 513 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 PEX19P40855 299 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 SLC39A14Q15043 492 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 POSTNQ15063 836 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 MSANTD4Q8NCY6 345 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 SELENOOQ9BVL4 669 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 RAB21Q9UL25 225 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 ZNF185O15231 689 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 CLNS1AP54105 237 aaKnown RBP14.3□□□□□ -0.12
VAMP1-201ENST00000361716 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-201ENST00000361716 CCDC122Q5T0U0 273 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 BRAPQ7Z569 592 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
VAMP1-201ENST00000361716 IFT88Q13099 833 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 PDIA6Q15084 440 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 SLC52A2Q9HAB3 445 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 HELLSQ9NRZ9 838 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 DACH1Q9UI36 760 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 PAX7P23759 505 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 HPDP32754 393 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-201ENST00000361716 KRT9P35527 623 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-201ENST00000361716 FXR1P51114 621 aaKnown RBP eCLIP14.29□□□□□ -0.12
VAMP1-201ENST00000361716 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 CCDC114Q96M63 670 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 TAB2Q9NYJ8 693 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 EYA2O00167 538 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 RPS6KA5O75582 802 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 MYBL2P10244 700 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 USP5P45974 858 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 GRIN1Q05586 938 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 ZMYM1Q5SVZ6 1142 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 NAPBQ9H115 298 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 CABP5Q9NP86 173 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 ABCF2Q9UG63 623 aa14.29□□□□□ -0.12
VAMP1-201ENST00000361716 IPO7O95373 1038 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 GBP2P32456 591 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 NR5A1Q13285 461 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 BIRC2Q13490 618 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 COG1Q8WTW3 980 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 ZNF274Q96GC6 653 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 VEZTQ9HBM0 779 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 ERICH2A1L162 156 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 ZPR1O75312 459 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 ERCC3P19447 782 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 CEP85LQ5SZL2 805 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 SWT1Q5T5J6 900 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 PLIN2Q99541 437 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 NWD1Q149M9 1564 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 BACH1O14867 736 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 TRIM22Q8IYM9 498 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 PRPF38AQ8NAV1 312 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 DSCC1Q9BVC3 393 aa14.28□□□□□ -0.12
VAMP1-201ENST00000361716 ALDH8A1Q9H2A2 487 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 TTF2Q9UNY4 1162 aaKnown RBP14.28□□□□□ -0.12
VAMP1-201ENST00000361716 C1orf167Q5SNV9 1468 aa14.27□□□□□ -0.12
VAMP1-201ENST00000361716 ATP1A1P05023 1023 aaKnown RBP14.27□□□□□ -0.12
VAMP1-201ENST00000361716 PPARAQ07869 468 aa14.27□□□□□ -0.12
VAMP1-201ENST00000361716 NAIF1Q69YI7 327 aaPredicted RBP14.27□□□□□ -0.12
VAMP1-201ENST00000361716 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.12
VAMP1-201ENST00000361716 SAR1BQ9Y6B6 198 aa14.27□□□□□ -0.12
VAMP1-201ENST00000361716 GOLGA6L7A0A1B0GV03 622 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.13
VAMP1-201ENST00000361716 EXOSC10Q01780 885 aaKnown RBP14.27□□□□□ -0.13
VAMP1-201ENST00000361716 NEDD9Q14511 834 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 TOM1L2Q6ZVM7 507 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 DIS3L2Q8IYB7 885 aaKnown RBP14.27□□□□□ -0.13
VAMP1-201ENST00000361716 IFT81Q8WYA0 676 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 TBC1D31Q96DN5 1066 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms