RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 FAM117BQ6P1L5 589 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 CPLX3Q8WVH0 158 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 SPATA17Q96L03 361 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TMCC3Q9ULS5 477 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 CFAP69A5D8W1 941 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TSPY2A6NKD2 308 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TSPY3P0CV98 308 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TSPY8P0CW00 308 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TOP1P11387 765 aaKnown RBP10.19□□□□□ -0.78
CALD1-201ENST00000361675 TSPY1Q01534 308 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TRIM68Q6AZZ1 485 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 SLC30A9Q6PML9 568 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 NEK9Q8TD19 979 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 TSGA10Q9BZW7 698 aa10.19□□□□□ -0.78
CALD1-201ENST00000361675 INO80BQ9C086 356 aaPredicted RBP10.19□□□□□ -0.78
CALD1-201ENST00000361675 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 LINC00854A0A1B0GVQ3 168 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 FGFR1OPO95684 399 aaKnown RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 PECAM1P16284 738 aaPredicted RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 SCNN1BP51168 640 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 SEPT2Q15019 361 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 B4GALNT4Q76KP1 1039 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 DPH6Q7L8W6 267 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 TCEANC2Q96MN5 208 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 HOOK1Q9UJC3 728 aaKnown RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 THRAP3Q9Y2W1 955 aaKnown RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 IKBKGQ9Y6K9 419 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 USP54Q70EL1 1684 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CBFA2T2O43439 604 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 C21orf2O43822 256 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 ME1P48163 572 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 GJA8P48165 433 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 AK2P54819 239 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 ARHGEF25Q86VW2 580 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 SYCP3Q8IZU3 236 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CABLES1Q8TDN4 633 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 SEL1LQ9UBV2 794 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 TTC41PQ6P2S7 1318 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CTAGE15A4D2H0 777 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 GOLGA6L10A6NI86 522 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 ZNF202O95125 648 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CTAGE8P0CG41 777 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 ARHGAP25P42331 645 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 POU5F1Q01860 360 aaKnown RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 PDCLQ13371 301 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 PREPLQ4J6C6 727 aaPredicted RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 ARHGAP27Q6ZUM4 889 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CTAGE6Q86UF2 777 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 NUTM1Q86Y26 1132 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 CTAGE4Q8IX94 777 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 NAP1L4Q99733 375 aaKnown RBP10.18□□□□□ -0.78
CALD1-201ENST00000361675 LIMCH1Q9UPQ0 1083 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
CALD1-201ENST00000361675 ZC3H4Q9UPT8 1303 aaKnown RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 PSDA5PKW4 1024 aaPredicted RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 STIM1Q13586 685 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 CUL4AQ13619 759 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 OLFML1Q6UWY5 402 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 SNX32Q86XE0 403 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 HPS3Q969F9 1004 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 TSC22D3Q99576 134 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 CLSTN2Q9H4D0 955 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.782e-7■■■□□ 15.9
CALD1-201ENST00000361675 CEMIPQ8WUJ3 1361 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 ZNF189O75820 626 aaPredicted RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 MAGEA8P43361 318 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 POLE2P56282 527 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 EIF4A1P60842 406 aaKnown RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 VSNL1P62760 191 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 KCTD16Q68DU8 428 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 TATDN2Q93075 761 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 SCAND2PQ9GZW5 306 aaPredicted RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 USP44Q9H0E7 712 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 SIL1Q9H173 461 aa10.17□□□□□ -0.78
CALD1-201ENST00000361675 ZNHIT6Q9NWK9 470 aaKnown RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 DDX20Q9UHI6 824 aaKnown RBP10.17□□□□□ -0.78
CALD1-201ENST00000361675 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
CALD1-201ENST00000361675 PROSER3Q2NL68 480 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 BTN2A1Q7KYR7 527 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 RPAP2Q8IXW5 612 aaPredicted RBP10.16□□□□□ -0.78
CALD1-201ENST00000361675 MPHOSPH8Q99549 860 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 PHLPP2Q6ZVD8 1323 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 FAM208AQ9UK61 1670 aaKnown RBP10.16□□□□□ -0.78
CALD1-201ENST00000361675 TIMM44O43615 452 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 PYGBP11216 843 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 GRM1Q13255 1194 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 RASA3Q14644 834 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 ARMCX5Q6P1M9 558 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms